Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4624 |
Symbol | |
ID | 1172207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4819728 |
End bp | 4820474 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637346333 |
Product | LuxR family transcriptional regulator |
Protein accession | NP_720140 |
Protein GI | 24376097 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTA AACTGGCGCT ATCAAATGCC AATACGGCAT CGACATTACA AGACGTTATT CAGGCGATAA GTGCTGCTTT GAAACCGCAC GGTTTTAGTG GATTCTGGTT TCAAGGGATC GCACATTGTG CGTATGAAAA CTATCACTTT CCAAAAGAAA CCAATCTGTT CTCGCAAGCC TCGTTGCGTA AACCCACTGC CAGCGTAGCG TCATCCCCTA AAGTTGCCCA ATTGCAGCGT TTTTATTTAA GTCAGATTGC CGCTTATGAT TTTAATTTTG GTTTTTCGTT AGATACGTCA AAATCTTATA TGTATCGCTT GTCGTGTGAG AAAAGTGATA AGGCTCGCCG ACTTTTTAAT AAGCACCATA TTCAAACTGT ATTAAGTTGG CCCGTTGCAT GCCATAGCAA TCGACATTGG GCAGGTCGCT TTATTCTGCT GAGTCATCTG AGTGATTCAG ACATCCAATT AACGGGTTTG AGTGCGACCT TAAAGGATGC CCAAAACAAG CTATTTGAAT GGAATAAGTC ATTGTTTAAT CCGTTTCTTC AAAGCTCTCT ACTTAAAGAT AATGCGAGAG ATATCTTAGT TATGGTCGCA AACGGCCTGC AGAATGACGA AATTTCAACC CAGCTCCCGA TAAGTATTAG GGGAGTTGAA TACCATATGG AATCAATGCG TAGGAAGTTT GGGGCGACGA ATCGAGCAAA CTTAATTCAT CTCGCCCATC AATATGAGTT GATCTAA
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Protein sequence | MDAKLALSNA NTASTLQDVI QAISAALKPH GFSGFWFQGI AHCAYENYHF PKETNLFSQA SLRKPTASVA SSPKVAQLQR FYLSQIAAYD FNFGFSLDTS KSYMYRLSCE KSDKARRLFN KHHIQTVLSW PVACHSNRHW AGRFILLSHL SDSDIQLTGL SATLKDAQNK LFEWNKSLFN PFLQSSLLKD NARDILVMVA NGLQNDEIST QLPISIRGVE YHMESMRRKF GATNRANLIH LAHQYELI
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