Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4525.1 |
Symbol | |
ID | 1172116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4721354 |
End bp | 4722085 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637346244 |
Product | LysR family transcriptional regulator |
Protein accession | NP_783547 |
Protein GI | 28275292 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC ACTTAGACTT AAACTTACTG CCGGTACTAG AAATTCTCCT CGAGGAGCAG AGCGTCACGG CCGCGGCGGC GCGACTGCAT TTAAGTCAGT CGGCGGTGAG CAAGCAATTG ACTCGCCTGC GGGAAGTGTT TGATGACCCC TTATTCGAGC GTACCGCTTA CGGGCTAAAG CCGACGCCCA AGGCGCTGTC GCTGGCGCCC GACTTACGCC AATGCTTACA GCAATTGGCG CAATTTACTC GGCCCGATAG TTTTGAGCCC GCCTTAAGCC AAAGGCAATT TCGAATGCAT TTGGTCGAAA CCACCTATTC GCTGACCTTT CCGTATTTTA TGCCCTCATT GCTCGTCCAA GCGCCCTGGG TGAGTCTCAA TTGCCAAACC TGGCGGCTCG ATACCATGGA CAGACTCCTG CGCTGCGATA TCGACTTGGC TATTGGCTGC CGCGAATGGG ATGAACGCTC ACCCATGCAT GTTAACCATA TTCCGGACGA TCTCCACTAT GTTGAATTAG TGCAGGATTA TACGGTTTGC CTGATGCGCC GCGACCATCC TGCATTAGCG CAGGAATGGG ATCTCGACAC CTTTTTAAGT TATCGCCAGT TGCAGGTAGC CTTTGGCGGT TTAGAGCATT GGTTGTTAGA TGATGTGCTG CAAATTGCAA GGGCGGAAAC GGGATATTGC GGTGAATATG ACCGACTTCC AGAGTGCGCT GGCCCTGTGT GA
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Protein sequence | MLKHLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK PTPKALSLAP DLRQCLQQLA QFTRPDSFEP ALSQRQFRMH LVETTYSLTF PYFMPSLLVQ APWVSLNCQT WRLDTMDRLL RCDIDLAIGC REWDERSPMH VNHIPDDLHY VELVQDYTVC LMRRDHPALA QEWDLDTFLS YRQLQVAFGG LEHWLLDDVL QIARAETGYC GEYDRLPECA GPV
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