| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4110 |
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| Symbol | |
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| ID | 1171723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4268589 |
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| End bp | 4269878 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345843 |
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| Product | MSHA biogenesis protein MshN, putative |
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| Protein accession | NP_719640 |
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| Protein GI | 24375597 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGA TCAACAAGAT GCTGCAGGAT CTGGACAAGC GCCAGCAGGG GCATTCGCTG
AGTAATATCA CGGTGAATCA AGCCCAGTAT CTGGGTCGGA CAAGCTCGTC ACGTAAATGG
TTAGCGATTT GTTTGCTATC TCTGTTACTG GGAGGCTTAT CTATGTATGC CTTTCAAGCG
AGTTACCGGT CGCAACAAAC GACGATCATT CCTTCGAATA CTGTTGCAAC TCCGTCAACT
CATCAGCTTG AGTCATCGTC CCAATCAAGT GTGCCCATAG AGGCAACAAC GAATACAGCC
TCTATCGCGA CAACGACTGA AGTTGTGCAA ACCAAGCCGC AGCAGTCGAC GGGCACTCAA
GCCAGCGATA AGCTTGATAC CAGTGTTGCC CAGCCAAGTC CTACTGACAA AGCGACACTC
GAGGCGACTT CACAAAGTGT GCCTGCGCTG GCTAAAGAGT CTTCCGCCCC TGTTTCTGCG
GTCAATCTTC CTTCGGCAAA TGTTGCGCAG GCTCAAGCGA GTGATACTAA TCGCCTTATC
GATCGCGCTA AAGTTCACCA AACGGAGCCA AATGCAACTG TCTCCAATCA AACAGCGCAA
GTCGCTCCTG AACCAAGCCA AGCTAAAGCC ACTGCAAACG AACAGGCAGA GTTTACTGGT
GTTCAATCAA AGGCGGCTGG TCAAATGGCG GTCAAGGAAG TAAAGCTTTC ACCGAGTCAA
TTAGCACAAA AACAGGTGGC ACTGGCGAGC GATGCTGAAA AACAAGGTCA GTTGCTCAAA
GCCATGGGCT ACTATGATAA AGCGCTCAAG TTAGATCCGA GCTTGCATGA GGCGCGCAAA
CAACTCGCGG CACTACATTA TGGCCAAGGC GAGCTAGCAC AAGCGGCTGA AGTGCTCAGT
CAAGGTCGAT TACTGTACCC GCAAGAGTAT GAATTTTATC TACTATTAGC AAGGATACAA
CACGCAATGG GCGATACTGA CTTGGCCTTA GCGAGTCTTG CACAAATCCC TGATCGCCAT
GTATTAGCAA GGCAAAAGTG GTTAGCTCAG ACGGATTTAG CCCAAAAACA AGGCCAATTT
ACATTAGTAG AACAGGCGTA CCGCCAGTTA TTACAGCAGG AGCCACAGCA GGCGAAATTG
TGGATGGGAT TGGCCTATGC ACTAGACTCA CAACAACATT TCGCTCAAGC CAGCCAAGCC
TACCGCACAG CATTAAGCTA TTCCGGCTTA TCAACTCAGG CCACGGCTTT TATTGAACAA
CGCTTACTAC AACTAGGAGA TAGCCAATGA
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| Protein sequence | MSVINKMLQD LDKRQQGHSL SNITVNQAQY LGRTSSSRKW LAICLLSLLL GGLSMYAFQA
SYRSQQTTII PSNTVATPST HQLESSSQSS VPIEATTNTA SIATTTEVVQ TKPQQSTGTQ
ASDKLDTSVA QPSPTDKATL EATSQSVPAL AKESSAPVSA VNLPSANVAQ AQASDTNRLI
DRAKVHQTEP NATVSNQTAQ VAPEPSQAKA TANEQAEFTG VQSKAAGQMA VKEVKLSPSQ
LAQKQVALAS DAEKQGQLLK AMGYYDKALK LDPSLHEARK QLAALHYGQG ELAQAAEVLS
QGRLLYPQEY EFYLLLARIQ HAMGDTDLAL ASLAQIPDRH VLARQKWLAQ TDLAQKQGQF
TLVEQAYRQL LQQEPQQAKL WMGLAYALDS QQHFAQASQA YRTALSYSGL STQATAFIEQ
RLLQLGDSQ
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