| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3337 |
|---|
| Symbol | |
|---|
| ID | 1171019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3484043 |
|---|
| End bp | 3485443 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637345142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_718891 |
|---|
| Protein GI | 24374848 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAC TTTGTTCCAC CGTCCAAACA CTAGAAAAGC TTGCTAAGGA TGATGTCTCT
TCACTCGCCT TATTGGGCCG TAGCGTGATG CACGATAATG CCCTCACATC GCGTATTTTA
AGGGTTGCAA ACAGTGCGAT TTACCATAAA GGCAGTACGC AAATATCGAC AGTAAGCCGA
GCTGCCATTG TGTTGGGTTT TGATGCTGTG CGTAATATTT GTATCACGGC GCAATTGTTA
TCTAGCCTGT TAGAAAGTAA AAATCTTGCA CCTTCGGTAT ATCAAAGATT AATCAAATTA
ATGGCTAAGG CATTTCAAGC CGCGATGCTA ACTCGGATGA TGTTGAGTGA TTATGATGAT
GACATTCAAG AAGAGGCCTT TATAGCCTGT TTACTTTTTC ATATCGGTGA GAGTGCATTT
TGGAGTATCG GGGGGGAATT TACCGAAACC CTCGATAGCC AATTAACAGA ATGTGAAACC
TCTGCGGATG AGCGAAGCCT TATTCGTGAA ACCATAGGTA CTTCTTTTTC GCAGTTAACT
CAGAGTATTG CGCGCCATTG GGGATTAGGA GAATTATTGA TCCAAGCGGT AAATTACCCG
GATGACCCTC GTCCCGAGAT ACGATCTATA TTTTTAGCAG ATAAGCTTTG TGACACACTC
TCGGTGGCCA CGCCAGATAA AAATGATTTA GAGAAGTATA TCAATCAGGC TGCCAATTTT
ACTGGGCTTG ATGAAACGGA ATTCACCTTA AAAATGCAGC GCTGTACCAA GGCGACCCAT
AAATTAGCTG AAGCCTATGG TGCTAAAGTG CTGATTGATT ATCTGCCTGA TCCCCAAAGG
ATTGATAAGC TTGAGCCTTA CTTACCTGAA GCCGAACTGC CCATTTTTGA AGCCAATTTA
AATGTCCAAT TAGTAAAACT ACGTGAGCTT ACAGCCTTCG CGATCAATAA AGCTGATTTT
AATCAAATCA TGCAAACCGT GCTTGAGGGG ATTTTAGAGG GCGTCGGGGT AGACCGCTGT
GGTGTGTTGC TGTTGTCTCC CAGCCGTAAA CAGCTACAGC CAAGGATTAT GCTTGGCAGA
GATGCAGAGG AAATGAAGCG GCAATTTATT ATCGAACTTG GGGATAGAAA AGGCTTATTT
CCAATGGCGA TGGAGCATAA AGAGTCGCTT TGGGTCGACA GTCCCTGCGC TAAAAAATGG
CAAGAGCAAT GCCGAGAGTT AAAGGTACAA CTGCCAGAAT CGGGTTTTTT AGTGGCGCCG
TTGTTGGTGG ACAATAAAGT GATCGGCTTT TATTACGCCG ATAGAGGGCC ATCAGAGAGG
TGTTTTGCAG AAGTGGATTT TCAAGCTTTT ATCCACTTCT CACAGCTTGC AAATGTGTGT
TTTACCGTGT CCTTAAAATA G
|
|---|
| Protein sequence | MPALCSTVQT LEKLAKDDVS SLALLGRSVM HDNALTSRIL RVANSAIYHK GSTQISTVSR
AAIVLGFDAV RNICITAQLL SSLLESKNLA PSVYQRLIKL MAKAFQAAML TRMMLSDYDD
DIQEEAFIAC LLFHIGESAF WSIGGEFTET LDSQLTECET SADERSLIRE TIGTSFSQLT
QSIARHWGLG ELLIQAVNYP DDPRPEIRSI FLADKLCDTL SVATPDKNDL EKYINQAANF
TGLDETEFTL KMQRCTKATH KLAEAYGAKV LIDYLPDPQR IDKLEPYLPE AELPIFEANL
NVQLVKLREL TAFAINKADF NQIMQTVLEG ILEGVGVDRC GVLLLSPSRK QLQPRIMLGR
DAEEMKRQFI IELGDRKGLF PMAMEHKESL WVDSPCAKKW QEQCRELKVQ LPESGFLVAP
LLVDNKVIGF YYADRGPSER CFAEVDFQAF IHFSQLANVC FTVSLK
|
|---|
| |