| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3314 |
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| Symbol | |
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| ID | 1170999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3466069 |
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| End bp | 3466857 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345122 |
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| Product | fimbrial biogenesis and twitching motility protein, putative |
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| Protein accession | NP_718868 |
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| Protein GI | 24374825 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATG GATTGTCAGG GTTTTCATTA GCAATCGCCC TGTCATTAAC AGTGACGGGG
TGCGTAACTG AGCGTACCTA TACAGGGACT GATATTCCGG TGTCGGAGCG AAAACTCGAC
AGAGTCGCTG CTGCCCGTGA GCGTATGCAG CTCGGTTTAA CTTATCTTAA TCGAGGTAAC
TCGGAACAAG CCAAGTACAA TCTTGATAAA GCAATAGAAT ATGCGCCAGA GCTCGAAGAT
GTTCATGTGG CAATGGCTTA TTACTATCAA ACCGTGGGCG ATTTAGTACG TACCGAACGG
GCGTATCAAG ACGCAATTAA TACCAAGGAC GCCTCTGGCG ATTCCATGAA TAACTTTGGG
GTGTTTTTGT GCCAACAAAA GCAATACGAC AAAGCTGAAA AAATGTTTTT GGCTGCAATA
GAAATGCCCA AATATACCCG TACCGCATCC AGTTATGAAA ACTTAGGCCT TTGCAGCCGA
GACGCGGGAC GAGCAGAAAA GGCACGACAG TATTTTCAGA TGGCGTTAAA GTATGACCCG
AGACGCTCGG TGTCGTTACT GGAGCTGGTT GAGCTTGGGA TGAATAAAGG TGATTATATC
GACGCGCGTA ACCAATTAGC GCGTTATCAC CAAGTGGCAG CCCAGACTCC GGAGAGTTTA
ACGCTCGGAA TAAAAATTGA GCAGGCCTTG AATGATGATG CGGCTATGAA GCGATTTGGC
ATTTTATTGC TTGCCAAATT CCCCGCATCG TCTCAAGCCA AGCAATACAG AGTTAATTTG
CATCAATGA
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| Protein sequence | MKHGLSGFSL AIALSLTVTG CVTERTYTGT DIPVSERKLD RVAAARERMQ LGLTYLNRGN
SEQAKYNLDK AIEYAPELED VHVAMAYYYQ TVGDLVRTER AYQDAINTKD ASGDSMNNFG
VFLCQQKQYD KAEKMFLAAI EMPKYTRTAS SYENLGLCSR DAGRAEKARQ YFQMALKYDP
RRSVSLLELV ELGMNKGDYI DARNQLARYH QVAAQTPESL TLGIKIEQAL NDDAAMKRFG
ILLLAKFPAS SQAKQYRVNL HQ
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