Gene SO_2671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2671 
Symbol 
ID1170373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2798918 
End bp2799508 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content50% 
IMG OID637344497 
Producthypothetical protein 
Protein accessionNP_718255 
Protein GI24374212 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAT CCTCTGCACT TTCTTATATC AATGGGTTTT GTTTTTCGAC TGCGGGTTAC 
TCGCCTGAGT TCTGCCATGC AGTGCGCTTT GTGCTGATTG AAGAAGGCGC ACTTAATCAA 
GACGGCACAC CCAAGCCAAA CCTTGGATAT GTAAACGACC CAAAAGATAA AGGCGGCGAA 
ACCAAGGGCG GCATTAGTAA ACGCGCTTTC CCCAATATCG ATATTGCTGC ACTGACACTC 
GATGGCATTG TTGCGCTGTA TCACCGCTAC TTTTGGAAGC CTGCCTACTG TCAAGATTGG 
CCCGCATCGG TGGCGCTATA TACCTTTGAT GCCGCAGTAC AGCATGGCGT AACCAATGCG 
CTATTAATGC TGCAAGAAAT CGCTGGCACC AAAGCCGATG GCAAGGTTGG CCCCGCCACT 
CGCAACGCCG TTAACTCCGC TGATAAAGAA TATTTGTGTG CCCGTTATGG CTTGCGCCGT 
GCGCGTTTTT ATGCCCGTAT CATCAAAAAG GACACTTCGC AAACCCGCTT TATTGAGGGC 
TGGCATAACC GCTTAGTGAA CCTCACCAAT GCCGCATGGG AGCTGCAATA A
 
Protein sequence
MFSSSALSYI NGFCFSTAGY SPEFCHAVRF VLIEEGALNQ DGTPKPNLGY VNDPKDKGGE 
TKGGISKRAF PNIDIAALTL DGIVALYHRY FWKPAYCQDW PASVALYTFD AAVQHGVTNA 
LLMLQEIAGT KADGKVGPAT RNAVNSADKE YLCARYGLRR ARFYARIIKK DTSQTRFIEG 
WHNRLVNLTN AAWELQ