| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2455 |
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| Symbol | |
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| ID | 1170170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2571873 |
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| End bp | 2572754 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344288 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_718045 |
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| Protein GI | 24374002 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTC GGTCCGATGA TTTAGAAATA CTGCTTGCCG TCGTCGACAG TGGTGGTTTT
TCAGCGGCAG CTGAGCTGTT AGATATTCAA GTTGCTCGCG TGTCTCGAGC GGTGAGCAAG
GTTGAAAGCC AAGTTGGTGT TTCAATTTTA AATCGCACGA CTCGCCGGCT CGAATTAACC
GAGGAAGGCC GCCAATTTGT TGAAACCATC CGGCTTGGCT TATTACAGAT CCAGCAAGCT
GAAGAGGAGA TCATCACTCG TGGAGAGCTA CCAAGAGGTC GTTTACGTGT CGATGCCGCC
AGTCCCTTTG TGTTTCATCA ATTAGTGCCG CTTATCCGGC CATTTAAGCA AACCTATCCC
GATATTGAAT TGGAACTGAC CTCCAACGAA GGTTTTGTCG ATTTGCTTGA AAAGAAAACC
GATCTCGCGA TCCGCATTGG CAACTTAACC GATTCGACTT TGCATGCTAG GCCGCTTGGG
AAAAGTTTGC TTTACATTGT GGCCTCACCA GATTACCTAT CAAGGCGCGG TTTTCCCAAT
AAAAGCAGCG ATTTAATTCA CCACGATTCG CTGGGATTTT CTACCCCTAA AACACTCAAT
GATTGGCCAC TGAAAGGATT TACTCGGCTT ACACCTACAT TAACCTCGAG TAACGGTGAA
ACGTTAAGGC AACTTGCGTT AACAGGCAAC GGTATTGCCT GCCTATCGGG ATTTATGGTG
AAAAAGGATA TCGCTGAAGG GCGTTTAATC CCCTTATTGG AGAGTGAAAA AATCAGCAAT
AGCGGCCGAG AGCATATCAA TGCGGTGTAC TATAAATCTT CTACCGTCGC GAAACGTATC
TCAGCCTTTA TTGATTTTAT TCAGCCTAAG CTAGCACTGT AG
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| Protein sequence | MKTRSDDLEI LLAVVDSGGF SAAAELLDIQ VARVSRAVSK VESQVGVSIL NRTTRRLELT
EEGRQFVETI RLGLLQIQQA EEEIITRGEL PRGRLRVDAA SPFVFHQLVP LIRPFKQTYP
DIELELTSNE GFVDLLEKKT DLAIRIGNLT DSTLHARPLG KSLLYIVASP DYLSRRGFPN
KSSDLIHHDS LGFSTPKTLN DWPLKGFTRL TPTLTSSNGE TLRQLALTGN GIACLSGFMV
KKDIAEGRLI PLLESEKISN SGREHINAVY YKSSTVAKRI SAFIDFIQPK LAL
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