| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2119 |
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| Symbol | |
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| ID | 1169862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2223331 |
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| End bp | 2225028 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637343984 |
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| Product | response regulator |
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| Protein accession | NP_717722 |
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| Protein GI | 24373679 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCCA ACTTAGAAAT AAATCACTTT ATTCTGATTG TAGATAATGA TGCCATTGCC
AGTCAGTCAA TAAGTGATTT TATTCACGGA AAAGGTTATA ACGTGATTAT CTGTGATAAT
CTAGAAGATG CATTTTTTGA AGTGTCACTC AATAAAATTG ATTTGATTCT AGTTAATTAC
TTTCAACCCG ATGGTACAGC CTTAACATTG CTGGCTCATC TTGATTCCTT GAGTAAAGAA
ATCCCTGTTG TAGTGATAAA CGATAAGAAA GAACCGCAGG CATTTTTAGA TTGCTTTAAA
ATGGGTGTTT TAGATTTTAT TGTTAAACCA ATTAATGTCG AGGTCTTTTG GTATAAGGCG
GAGATTTTAC TGACACGGAT TAAGCTGCAG AGAAAAGTCA AGCAACAAAG TATTGAACTA
GAAAAGATGC TTTATGAAAA AGCTAGAGAA GAAAAACTAG CGCGCCATAT TTTTGAACAC
TTAGTCAATA TTGACAATAA TCAATTTGAT TTTATTAAAT CCTTTTGTCA GGCCAGTGCT
AATTTTAGTG GTGATATTTT ATTAAATGGA GTATCTCCCA ACGGTAATCT ATTCATCATG
TTAGCTGATT CAACTGGTCA TGGCCTGAGT GCCGCTATGC CTATCATGTT ATTAACCAGT
ACTTTTAGAG CTATGGTTTC AAAGGGGTTT TCATTAGTTT CATTGATTTA TGAACTCAAT
GGAAAAGTAT TTGATGAATT TCCAGAGGAT AGGTTTGTTG CCTGTATTCT TCTTGAAGCG
GATTTATTTC GTAATAAACT GTATGTGTGG AATGGTGGAA TGCCACCAGT CTATCTTCGC
TTAGGTCATG ATGAACAACA TTCTGATGAA CGAGCTTCAA TCAATAAGGC GTTCAAATCA
ACCAACATGG CCCTTGGTAT TTTACCGCCA AACACATTTG TTGCAGATAT TTTTTCTATT
GATTTACCCA GTGAAGGATA TGCATGTTTA TTTAGTGATG GTTTAATCGA ACAACCAGCA
TTGGATGGAA GTCCATTTGG GATGGTAAGA CTAAATGCAC TGTTTAATGA AAATTTAGAT
GCATTGCCAG TTTTTTTGGA TGAGCATTTT TCTAAATATT TTTATGGTGA CAATATTGCT
GATGATATTA CTATTTGCAC TCTTGACTTC AAGCGTTTAC ATCAATGGCA TCAAGCTCGG
GATTTTAATC ATCTCGTATC AAATCTTAAT GGAGAGTTTA ATTGGGATGT GAAAATATCA
GGCTCAATGT TGTTGGATGC TGATTATTTA GGGACGTTGA ATCAGTTTTT AAGTGTATTT
GGCTTTGCTA CAAACTTTTG TCAAAGAGTA TTTACTGTCG TGGCTGAATT GTTTAACAAC
GCTATCGACC ATGGAGTCCT TGAATTAGAC TCTAGACTAA AAAATGATCC TGAAGGTTTT
GAATTGTACC ATAGTATAAG AGATAGTTAT GCAGAGCGGT TATCTTCGGA TGATTGGGTA
AAAGTGTGCA TAACTTGGAA CCATATGAAT GAGCTAGTGA TTACTGTCGC TGACAGTGGA
AAAGGGTTTG TTGGTTTTGA TAAATCCATT TCAAGTTACC CTGAGCTTTC TGGTCGAGGT
ATATCACTGG TGAAAACATT ATGTAAACAC TATGAATTAA TTTCACCCGG TAATATCACT
AGAGTAGTCA TGGAATAG
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| Protein sequence | MSANLEINHF ILIVDNDAIA SQSISDFIHG KGYNVIICDN LEDAFFEVSL NKIDLILVNY
FQPDGTALTL LAHLDSLSKE IPVVVINDKK EPQAFLDCFK MGVLDFIVKP INVEVFWYKA
EILLTRIKLQ RKVKQQSIEL EKMLYEKARE EKLARHIFEH LVNIDNNQFD FIKSFCQASA
NFSGDILLNG VSPNGNLFIM LADSTGHGLS AAMPIMLLTS TFRAMVSKGF SLVSLIYELN
GKVFDEFPED RFVACILLEA DLFRNKLYVW NGGMPPVYLR LGHDEQHSDE RASINKAFKS
TNMALGILPP NTFVADIFSI DLPSEGYACL FSDGLIEQPA LDGSPFGMVR LNALFNENLD
ALPVFLDEHF SKYFYGDNIA DDITICTLDF KRLHQWHQAR DFNHLVSNLN GEFNWDVKIS
GSMLLDADYL GTLNQFLSVF GFATNFCQRV FTVVAELFNN AIDHGVLELD SRLKNDPEGF
ELYHSIRDSY AERLSSDDWV KVCITWNHMN ELVITVADSG KGFVGFDKSI SSYPELSGRG
ISLVKTLCKH YELISPGNIT RVVME
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