Gene SO_2019 details

Gene Information

• Locus tag: SO_2019
• Symbol: hemH
• ID: 1169771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2118185
• End bp: 2119231
• Gene Length: 1047 bp
• Protein Length: 348 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637343894
• Product: ferrochelatase
• Protein accession: NP_717625
• Protein GI: 24373582
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0276] Protoheme ferro-lyase (ferrochelatase)
• TIGRFAM ID: [TIGR00109] ferrochelatase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGCCT GCCGTGGTAT TTGGCTGATA AAAGGTAGCA CATTGACTTC TCCCTCTCCT 
GCGTTTGGCG TGTTATTAGT AAATCTTGGT ACGCCTGATG AACCCACTCC GAAAGCGGTT 
AAGCGATTTC TCAAGCAGTT TTTAAGTGAT CCTCGGGTCG TCGATTTATC CCCTTGGTTG 
TGGCAACCCA TTTTGCAGGG GATTATCCTG AACACCCGTC CTAAGAAAGT CGCTAAACTT 
TATCAAAGTG TGTGGACGGA GCAAGGTTCG CCGTTAATGG TGATTAGTCA GTGCCAAGCC 
CAAAAGTTGG CAACGGATTT AAGCGCCACC TTTAATCAGA CCATTCCGGT GGAACTGGGT 
ATGAGCTATG GCAATCCTTC GATTGAGAGT GGCTTTGCCA AACTCAAAGC CCAAGGCGCC 
GAACGTATCG TGGTGCTGCC GCTGTATCCG CAGTATTCCT GCTCAACCGT CGCCAGTGTG 
TTTGATGCGG TAGCGCATTA TTTGACTCGC GTGCGTGATA TACCTGAGCT GCGTTTTAAC 
AAGCAGTATT TCGCCCATGA AGCCTATATT GCGGCGCTGG CGCATTCGGT AAAGCGCCAT 
TGGAAAACCC ATGGTCAGGC CGAGAAGCTG ATTTTATCTT TCCACGGGAT CCCGCTGCGC 
TACGCGACCG AAGGCGACCC ATACCCAGAG CAGTGCCGCA CCACCGCCAA GTTATTAGCG 
CAGGCCTTAG GCTTGACCGA CGGACAATGG CAAGTATGTT TCCAATCCCG CTTCGGTAAA 
GAAGAGTGGT TGACGCCCTA TGCCGATGAG TTGCTGGCGG ATTTACCCCG CCAAGGCGTG 
AAAAGTGTCG ATGTGATTTG CCCTGCCTTT GCTACCGATT GCCTTGAAAC CCTAGAAGAA 
ATCTCGATTG GCGCGAAAGA GACCTTCCTC CATGCAGGTG GCGAAGCCTA TCATTTTATT 
CCTTGTTTGA ATGATGATGA GCTACATATA GAGCTACTCA GGTTATTAGT ACAAGAACAA 
ACGCAGTCTT GGATAAGTGC AGAATGA 

 

Protein sequence

MLACRGIWLI KGSTLTSPSP AFGVLLVNLG TPDEPTPKAV KRFLKQFLSD PRVVDLSPWL 
WQPILQGIIL NTRPKKVAKL YQSVWTEQGS PLMVISQCQA QKLATDLSAT FNQTIPVELG 
MSYGNPSIES GFAKLKAQGA ERIVVLPLYP QYSCSTVASV FDAVAHYLTR VRDIPELRFN 
KQYFAHEAYI AALAHSVKRH WKTHGQAEKL ILSFHGIPLR YATEGDPYPE QCRTTAKLLA 
QALGLTDGQW QVCFQSRFGK EEWLTPYADE LLADLPRQGV KSVDVICPAF ATDCLETLEE 
ISIGAKETFL HAGGEAYHFI PCLNDDELHI ELLRLLVQEQ TQSWISAE