Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1963 |
Symbol | |
ID | 1169723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2068671 |
End bp | 2069831 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343846 |
Product | hypothetical protein |
Protein accession | NP_717570 |
Protein GI | 24373527 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTTT ATGTGAAACA AGGCCAAGTA CCCCATAAGC GCCATATCGC ATTTGAGAAG GAAAACGGCG AGCTATACCG TGAAGAGCTG TTTTCAACCC ATGGTTTTTC CAATATTTAT TCCAATAAAT ATCACCACAA TATGCCGACG AAGGCGTTAG AAGTCGCCCC TTACCGCCTC GGTCACGGTG CTCATTGGGA AGACTCATTA GTTCAAAACT ATAAACTGGA TTCCCGCTCA GCCGATCGTG AAGGCAACTT CTTCAGTGCC CGCAATAAAA TCTTCTATAA CAATGATGTG GCAATTTACA CCGCAAAAGT CACCCAAGAC ACCGCTGAGT TTTACCGTAA TGCCTACGCC GATGAAGTGG TATTTGTGCA CGAAGGTGAA GGCACACTGT ATAGCGAGTA CGGAACCTTA GAGATTAAAA AATGGGATTA TTTAGTGATC CCACGCGGCA CCACACATCA ACTTAAATTC AACAATTACA GTAATGTGCG TTTGTTTGTG ATTGAAGCCT TTTCAATGGT GGAAGTGCCT AAGCATTGCC GTAATGAATA CGGCCAGTTA CTCGAATCCG CACCCTACTG TGAACGCGAT CTGCGCACGC CCATTTTGCA AGCTGCTGTG GTTGAGCGTG GTGCCTTCCC GCTAGTATGT AAATTTGGCG ATAAATACCA GCTGACAACG CTAGAGTGGC ATCCATTTGA TTTAGTGGGC TGGGATGGTT GTGTTTACCC TTGGGCATTT AACATCACCG AATACGCGCC CAAGGTTGGA AAAATCCATT TACCGCCTTC GGACCATCTC GTGTTTACCG CCCACAACTT TGTGGTGTGT AACTTTGTGC CGCGCCCCTA TGATTTCCAC GAGCGAGCCA TTCCCGCGCC TTACTATCAC AACAACATCG ATAGTGACGA AGTGCTGTAC TACGTTGATG GCGACTTTAT GAGCCGCACC GGGATTGAAG CAGGCTACAT CACCTTACAC CAAAAAGGCG TAGCGCACGG CCCACAGCCC GGCCGCACCG AAGCCTCGAT TGGCAAAAAA GAAACCTATG AATATGCAGT GATGGTGGAC ACCTTCGCCC CACTGAAATT AACCGAACAT GTGCAGCATT GCATGAGTAA AGACTACAAC CGCTCCTGGC TAGAAAACTA A
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Protein sequence | MPFYVKQGQV PHKRHIAFEK ENGELYREEL FSTHGFSNIY SNKYHHNMPT KALEVAPYRL GHGAHWEDSL VQNYKLDSRS ADREGNFFSA RNKIFYNNDV AIYTAKVTQD TAEFYRNAYA DEVVFVHEGE GTLYSEYGTL EIKKWDYLVI PRGTTHQLKF NNYSNVRLFV IEAFSMVEVP KHCRNEYGQL LESAPYCERD LRTPILQAAV VERGAFPLVC KFGDKYQLTT LEWHPFDLVG WDGCVYPWAF NITEYAPKVG KIHLPPSDHL VFTAHNFVVC NFVPRPYDFH ERAIPAPYYH NNIDSDEVLY YVDGDFMSRT GIEAGYITLH QKGVAHGPQP GRTEASIGKK ETYEYAVMVD TFAPLKLTEH VQHCMSKDYN RSWLEN
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