Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1887 |
Symbol | |
ID | 1169652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1983349 |
End bp | 1983951 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343776 |
Product | hypothetical protein |
Protein accession | NP_717495 |
Protein GI | 24373452 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCAGA TTGCGATTGT GATATTTGAT GAATTTACCG ATATCGATTT CTTTTTAATG CGCGATATTC TCGGCCGCAC AACAACAGAT TGGACAGTCA AAGTGCTAGG CACCAAACCT AGCCACAGGT CGAGTTTGGG GATGACGGTT GCAACCGATG GACATGTCGC GCAAGTCGCC GATGCTGACG TGGTGTTATT CAGCAGTGGC TACAAAGGCG TCCCTGCCGC ACTTGCTGAT CCTGAGTTTA TGTCGGCCCT TAAATTAGAT CCCTCACGGC AATTACTTGG CAGTATCTGT GCGGGATCAT TCTTCTTTGC CAAGTTAGGC TTACTCGACA ATATCTCGGC AACGACGCAT CCCGATGCTA AACCCGCATT AGTGGCCATG GGCGTGGAGG TGGAAGACTC TGCTCTGGTG ATCAATGGCA ATATTGCTAC TGCGGGAGGT TGTCTGTCCT CACTCTATTT AACGGGCTGG ATTGCGGAGC GCTTATTTGA CAGAGCGAAG CGCCGCGAAA TTCATCGGCA ACTGATCCCC GCAGGCCAAG CCGATGTTTT TGACGCTTTA ATCGAATCCT CGATTGCCTC AGCCATTCGC TAA
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Protein sequence | MYQIAIVIFD EFTDIDFFLM RDILGRTTTD WTVKVLGTKP SHRSSLGMTV ATDGHVAQVA DADVVLFSSG YKGVPAALAD PEFMSALKLD PSRQLLGSIC AGSFFFAKLG LLDNISATTH PDAKPALVAM GVEVEDSALV INGNIATAGG CLSSLYLTGW IAERLFDRAK RREIHRQLIP AGQADVFDAL IESSIASAIR
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