Gene SO_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1816 
Symbol 
ID1169589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1905664 
End bp1906344 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID637343703 
Producthypothetical protein 
Protein accessionNP_717424 
Protein GI24373381 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAC TTTTGCCAAT CAGCAGCCTG CTAGTGCTAC TCGGCTCTGC CTCAGTCTCT 
GCCGCAGATC TGAATATCCC TATGTCATTC GAATACCTTG CCCTCGACGG CAAAAAAGTC 
GAGTCCAGCG TATTCAACCA TAAAAGCAGT TTAGAATTGG CGCCCGGCAC CCACAAAGTC 
GCTATTCGCT ACCACGAAAT GGTGGAAGAT GATTTCAGTG ACAGCCAAAC TTTTGTTAAA 
TCATCTCCCT TTATTGTGAC CCTAGAGGTC GATGGCGATC ATCAATATTA TTTACAAGCC 
GCTGAAGGCA AAGTCGTTAA AAAGCCTAAA GTGTTTGCCC AAAATCCCCA AGTAGTACTA 
ACCCGTGCTG ACAAAGGTCA AGTGAACTAT CAGGTCACGA ATACAAACAT TGAAGAAGAG 
AGCTTCGTAT CTCGTCTATT CAGTGGTAAC CAAGCGGTGG ATGTTTCTGG TACTGCTGCC 
ACAGCGACAG GTGTTGCAGT CGCAGCGACG CCAGCACCTA CATCAGCGCA AGTCGCAGTA 
AGTGCGACAG CAACAACATC GCCAACCGAC GCCTCAAAAG CAACCGGTGC AAACCCACAG 
CAGATGTTGC AGTACTGGTG GTTACAAGCT GACGAGAAAA CTCGTAAAGA GTTTATGAGC 
TGGGCAATTT CACAGCTCTA A
 
Protein sequence
MKSLLPISSL LVLLGSASVS AADLNIPMSF EYLALDGKKV ESSVFNHKSS LELAPGTHKV 
AIRYHEMVED DFSDSQTFVK SSPFIVTLEV DGDHQYYLQA AEGKVVKKPK VFAQNPQVVL 
TRADKGQVNY QVTNTNIEEE SFVSRLFSGN QAVDVSGTAA TATGVAVAAT PAPTSAQVAV 
SATATTSPTD ASKATGANPQ QMLQYWWLQA DEKTRKEFMS WAISQL