Gene SO_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1720 
Symbol 
ID1169504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1806649 
End bp1807302 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content39% 
IMG OID637343617 
ProductDedA family protein 
Protein accessionNP_717330 
Protein GI24373287 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGT TATATCAACT CGCGCAAGCC ATGATCCATA ATGATTTAGC GGTATTATCA 
AACCCAAATG TGACGTTAAT GGTCAGCGGG GTGATTTTAT GCTTCTTAGT GATGGAAAAT 
GGCTTCATCC CGACCGCTTT TTTACCCGGA GATACCCTAC TCATACTCAC CGGAGTATTG 
ATATATCAAG ATGTTCTTCA CATGGGGATA GTACCACTGT TAATGGTGGC GACATTTATT 
GGTACAGCAA TAGGCTACTT GCAGGGCTAT TTCCTTGGAC ATACACAAAT GTACCACAGA 
CTACTGTCGC ATATAGATGA CAAACATCAG AAAAAAGCAC TTTATCTAAT TGATAAATAT 
GGAATACTAA CTTTGCTCGT CGCGCGTTAT ATACCGTTTG TACGCACAAT TTACCCCTAT 
ATTATTGGTG CAACTGGCGT CTCATGGAGC CGTTTTTTAG TGATAAACTT CATCAGCTCT 
GTGATGTGGA TTACTCCTTT GGTCGGTTTT GGCTATGTGA TTAGCCACAG TAAACTCGCT 
AACGAATATC AAACTCAGTT TATGAGCATT ATTGTGTACT TACCGATTGT GTTACTGGTC 
TCTGGCATAG TTACTTTAAT TTACAAATGG TTACGCAAAA AGAAAAAACT ATAA
 
Protein sequence
MDQLYQLAQA MIHNDLAVLS NPNVTLMVSG VILCFLVMEN GFIPTAFLPG DTLLILTGVL 
IYQDVLHMGI VPLLMVATFI GTAIGYLQGY FLGHTQMYHR LLSHIDDKHQ KKALYLIDKY 
GILTLLVARY IPFVRTIYPY IIGATGVSWS RFLVINFISS VMWITPLVGF GYVISHSKLA 
NEYQTQFMSI IVYLPIVLLV SGIVTLIYKW LRKKKKL