Gene SO_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1578 
Symbol 
ID1169381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1655033 
End bp1655644 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content45% 
IMG OID637343497 
ProductTetR family transcriptional regulator 
Protein accessionNP_717191 
Protein GI24373148 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA GCTGTAACTT TGATAGACAA GAAAAGCTCA TCCTCGCAAT GGAACTCTTT 
TGGCGGAAGG GTTTTGCCGA AACCTCGATT GCCGATCTGG TTGAGCATTT AGGCATTAAT 
CGCTTTAGTT TGTATAACAG CTTTGGCGAT AAACAGAGTT TGTATCGCGA ATGCCTGCGG 
TTTTACCTCG ACCATTTTTC CTTTGGAACA CAGGAACAAT TGTTGCATCC GCAGGCTGGA 
CTCGTAGACA TTCTGACTTA TCTCGCGCGA TTTGTGGCCT TACAGCGTGA GCAAAAGTAC 
GGTTGTTTTA TGCAGAATGC GCTAATGGAA AAGTGTCTCG ATGATGATTG TGTGCAGCAG 
GAATGCCAGC GGCGGTTTGC ACAATTGCAA TCGACTTTTA CTCAAGTATT AACGCACAGT 
CAATCGCAGG GCGAGTTAAG CTTATCGGTT CAACCTGAGG CGTTAGCGGC TTTTTTAGTG 
CTGCAATTAC AAGGAATTAG AGTGCTAGGT AAGGCGAAGG AATATACCTT GTTGGATAAT 
GCATTTGGGG TATTAAGCGA ATATCTTAAG CGTCTTGCGT TGACGCCACT TAACCCCGTT 
GACGGGGAAT AG
 
Protein sequence
MARSCNFDRQ EKLILAMELF WRKGFAETSI ADLVEHLGIN RFSLYNSFGD KQSLYRECLR 
FYLDHFSFGT QEQLLHPQAG LVDILTYLAR FVALQREQKY GCFMQNALME KCLDDDCVQQ 
ECQRRFAQLQ STFTQVLTHS QSQGELSLSV QPEALAAFLV LQLQGIRVLG KAKEYTLLDN 
AFGVLSEYLK RLALTPLNPV DGE