| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1307 |
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| Symbol | aqpZ |
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| ID | 1169130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1358613 |
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| End bp | 1359302 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343253 |
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| Product | aquaporin Z |
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| Protein accession | NP_716927 |
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| Protein GI | 24372885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACAAA AAATGGCGGC CGAATTTTTG GGTACACTCT GGCTCGTACT TGGTGGCTGT
GGCAGTGCTG TACTCGCTGC GGCGTTTCCA GAAGTGGGGA TTGGCTTACT GGGCGTTTCA
CTTGCCTTTG GTTTAACGGT TCTCACGATG GCCTTTGCGA TTGGCCATAT CTCAGGTTGC
CATCTCAACC CCGCAGTCTC TTTTGGGCTC TGGGCTGGCG GGCGTTTTCC GACATCTGAA
TTACTGCCCT ATATTATTGC CCAGGTAGCA GGCGGCATTG CTGGCGCTGG CGTGCTGTAC
TTAATCGCTT CAGGACAAGA AGGCTTTAGT TTAGCAGCGG GTTTTGCTTC CAATGGTTTT
GGGGAGCATT CTCCCGGCGG CTACAGCATG ATATCGGTCA TGATCTGCGA AATCGTAATG
ACCTTATTTT TTCTACTCGT CATTTTAGGC TCAACCGATG AACGAGCCCC CAAAGGGTTT
GCACCCATTG CGATTGGTCT TTGTTTAACC CTAATTCATC TGATCAGTAT TCCCATATCA
AACACCTCTG TAAATCCAGC CCGAAGCACA GGTCCAGCGC TCTTTGTTGG CGATTGGGCG
GTCTCACAAT TATGGCTATT TTGGGCCGCT CCGATCATTG GCGCCATTTT AGCAGGTGTT
ATTTACCGTT ATTTCAACGC AGCCAAGTAA
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| Protein sequence | MSQKMAAEFL GTLWLVLGGC GSAVLAAAFP EVGIGLLGVS LAFGLTVLTM AFAIGHISGC
HLNPAVSFGL WAGGRFPTSE LLPYIIAQVA GGIAGAGVLY LIASGQEGFS LAAGFASNGF
GEHSPGGYSM ISVMICEIVM TLFFLLVILG STDERAPKGF APIAIGLCLT LIHLISIPIS
NTSVNPARST GPALFVGDWA VSQLWLFWAA PIIGAILAGV IYRYFNAAK
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