| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1210 |
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| Symbol | |
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| ID | 1169038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1257113 |
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| End bp | 1258015 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343164 |
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| Product | lipoprotein NlpI |
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| Protein accession | NP_716834 |
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| Protein GI | 161486830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA ATAAAGTAGA GGTCGATAAA CGTCGCACCT TCGCGATTAT ATCGCACCCC
GACGCGGGTA AAACCACCAT TACCGAAAAA GTGCTGTTAT TCGGAAACGC GCTGCAGAAA
GCGGGTACCG TTAAGGGCAA AAAGTCGGGT CAGCACGCTA AGTCTGACTG GATGGAAATG
GAAAAAGACC GTGGTATTTC AATTACAACG TCTGTGATGC AGTTTCCCTA TGGTGGCGCG
CTCGTTAACC TACTCGACAC TCCCGGCCAC GAAGACTTCT CAGAAGATAC TTACCGCACC
TTGACGGCGG TCGACTCCTG CTTGATGGTC ATAGATTCGG CAAAAGGGGT TGAAGACCGA
ACCATCAAAT TGATGGAAGT AACGCGTCTG CGTGATACGC CAATCGTCAC TTTTATGAAC
AAACTCGACC GTGATATTCG CGATCCCATC GAACTGATGG ATGAAGTTGA GAATGTGCTT
AATATCGCCT GTGCGCCAAT CACTTGGCCT ATTGGCAGCG GTAAAGAATT TAAGGGTGTT
TACCATATTC TGCGCGATGA AGTGGTGCTA TACCAAAGCG GTATGGGACA CACGATTCAA
GAGCGTCGCG TGATTGAAGG TATCGATAAT CCTGAGCTGG ATAAAGCGAT TGGTAGTTAT
GCAGCTGATT TACGTGATGA AATGGAGTTA GTTCGCGGTG CATCTAACGA GTTTGATCAC
CAAGCCTTCT TAAAGGGGGA GTTAACCCCA GTATTCTTCG GTACTGCATT AGGTAACTTC
GGTGTTGACC ATATCCTAGA TGGTATCGTG GAGTGGGCTC CAAAACGTTG CCCCGTGAAA
GTGATCTACG CATGA
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| Protein sequence | MSLKIRTAVV AVLAGASLML AGCATTQSPL DNQNDVEGKL VIAPVMTDYK VEVTLAKLNE
ILSAVELTNE QRARFHYDRG VIYDSVGLRL MARIDFMQAL KLQPDLADAY NFLGIYYTQE
GEYDSAYEAF DGVLELAPNY DYAYLNRGIA LYYGDRNDLA LKDMQAFYAA DDKDGYRALW
LYLIQSKDDA AGAKRQLQEQ RKGLEADAWS TVIVDYYLGV KSRDQVFADA KLGLTHPKEY
AERLCEAYFY LAKMAIANKQ YQEAANYFRL ALATNIYDFV EHRYARIELA KVKGLLEGTK
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