Gene SO_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0861 
Symbol 
ID1168708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp889184 
End bp890140 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content49% 
IMG OID637342831 
Producthypothetical protein 
Protein accessionNP_716492 
Protein GI24372450 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTG CAGTTTCGAC ACCCAATTGG GATCTGGACG CCTCTATGCC TCCACTTATG 
CTCGCTAACT TATCCCACCT AGGCCTAATC AAAGTGGCCG GCGAACAGGG CCGGAGTTTT 
ATCCATGGCC AAGTGACCGC AGATATTAGC TCACTTGAAA CCAACCAATG GCGCTGGGGA 
GCACATTGTG ATCCTAAAGG TAAGATGCTG GCTAGCTTTA GAACCTTTAC GATTAAAGAT 
GCACTCTTGC TGCTGATGCC AAAGGACACC ATCGAAGTGG ATCTGCCGCA ACTGCAAAAA 
TATGCGGTAT TTAGCAAGGC TACCCTAAGT AATGCATCGG AGGAATGGTG TTTACTCGGC 
GTGGCGGGTG AGCAGGCTAA CCAATTCGTC ACCCAACACT TTGGTGAAGT CGCTCAGGAA 
CTGACTCTCA CCGAGCATGG CGCAATTTTA AAAGATGCGG ATCGATTTAT TTTGGTTCTA 
CAACCACAAG CCGCAAGTGC CCTCATTGCC GAGCACACCG TATTTGATGC CAGCGCTTGG 
CAAGCATTAG AAATCGCTGC GGGCTACCCC AACCTAGCGC CAAGCCATGC TAATCAGTAC 
GTACCGCAGA TGTGTAACCT ACAGGCTATC AACGGCATTA GCTTTAATAA AGGCTGTTAC 
ATGGGGCAAG AAACCGTGGC AAGGATGAAG TACCGTGGCG GAAACAAGCG TGCACTTTAT 
ATCCTCCATG GCACAACCTC GTTAACGATT AATCTAGAAA CTAGCCTTGA AATTGCGCTG 
GAAGACGGTT ATCGCAAAGG GGGACAAATC ATTGAATTCG TGCAACGCGG TAATCAAGTA 
TTGCTGACAG CGGTATTGGC AAACGATACA GAGAACGATG CCAAGCTGCG TTTTACTGAA 
GATGAGCAAT CCAGTTTGAC GGTTCAACCT TTGCCCTACT CTCTCGATGA AGCTTAG
 
Protein sequence
MTIAVSTPNW DLDASMPPLM LANLSHLGLI KVAGEQGRSF IHGQVTADIS SLETNQWRWG 
AHCDPKGKML ASFRTFTIKD ALLLLMPKDT IEVDLPQLQK YAVFSKATLS NASEEWCLLG 
VAGEQANQFV TQHFGEVAQE LTLTEHGAIL KDADRFILVL QPQAASALIA EHTVFDASAW 
QALEIAAGYP NLAPSHANQY VPQMCNLQAI NGISFNKGCY MGQETVARMK YRGGNKRALY 
ILHGTTSLTI NLETSLEIAL EDGYRKGGQI IEFVQRGNQV LLTAVLANDT ENDAKLRFTE 
DEQSSLTVQP LPYSLDEA