| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0815 |
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| Symbol | |
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| ID | 1168666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 827155 |
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| End bp | 829116 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342789 |
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| Product | TonB-dependent receptor domain-containing protein |
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| Protein accession | NP_716446 |
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| Protein GI | 24372404 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACAC ATCCAACAAA AATCGCGCTG CTGATCGGCA GCCTTTGCAG TTTTTCAATT
ATCGCGCCCG TTATGGCGGC TGACGATACC AGCACAGCTA AAGTCGATGA GCATCTTGTC
GTGATAGGCC GCTCTGATAA GACCCCGTTA AATATTGCCG CCAATGTGAA TGTGATTGAT
GCAGCAGCGA TTGAAATGAG TGGCGCGACT AATTTGACCG ACGTCTTACG CGGCCAAAGT
GGTATTCAAA TTTCGGATAA CAATATTGGT ACTAGCTTTG CTATGCGTGG TTTTAGCGCC
AGCACAGCGG TAAACAACAC CTTAATTTTA CTCGATGGTC GCCGCCTAAA TAACATCGAT
ATTGCCGCGC CTAGCTTAAA TGCGATTCCC TTAAATCTGG TTGAGCGCGT CGAAATATTA
TCGGGCAGTG CGGGCGTGCT CTATGGCGAT CAAGCCGTGG GCGGGGTGAT TAACATTGTG
ACTAAGTCGC CTGAGAATAC TGGCGGCAGC GTGCAATTAT CCGGCGGTAG CTTTAATACT
TACGAAGGTC GTGGCGACGT GTCTGGCGCA ATCAACAAGG ATTGGCGCTA TTTCTTGAGC
GGTAGTTACA ACCAAGGTGA CAACTATCGT CAGCATAATG CAAACGAAAC AGGGTCTATT
CTGGGTCGCA TTCAATATAA AACGGCGACG GATTCTTTCT TTGTCGAAAC CAGCTATTAC
GATGATGATC GTGAAAATCC TGGCTCATTG ACGGTCGATC AATTCAAGTT CGATCCACGT
CAGTCTTCCA ATAAAAGCGA ATATGTCCAT GAGATGACCA CTGCGGCGCG CAGCGGTTAT
CAGCATCAGC TTAACCAAAA CTGGGCGTTA GCGGCGGATT TGGATTACAG CGATACCTTA
GTCAGCTCCG TCAATTGGGG CGCGGGTAGC CATAACACCC GCTCGCTGTT GATGTTTAGC
CCCAAAGCTT TAGCCAACTA CAGTACACGC CAAGGCGAGC TAAACCTAGT GACAGGCTTA
GATATCAGCC GTGGTAAGGC CGATTACGAT TCTATGGCAC GTAGCAATGT GCAGGACATG
CAAAGTGCTT ATCTACAAGC CACTGTGCCA TTAAGCCATA CCTTAAGTTA TGTGGTAGGC
GGACGTTATG CGCGGGTGAC TGACGAGTTA GTCGATGGCA ATGTCTATCC AAATGGTATC
GATTTAGATG AAGATGCCAC CGCATTCGAG TTTGGCCTAA ACTATCGCCC GAGCGCCGAG
CACAGATTCT ACCTGCGTGG CGATGAGAAC TTCCGTTTCG CCAAGGTCGA TGAGCAAGCT
TACACCCCGA AAGATGTGTT TGGCTTAAAG CCACAGACTG GCCGCTCCTA TGAGGCGGGT
TGGGATTGGA CAGTTGCCAG CCAAAGTCTG CGCGTGAGCT TATACCGCCT CGATTTAGAA
GATGAAATTG TCTTTGACCC AAGTGCGGAA AAACCTGTTG GTGGTAGTTT TCAAGGTGCA
AACGTTAATG CCGATGCCTC ACGCCGTTAT GGCGCGAGTG CCGATTGGGA TTGGCAGGTG
ACTCAAGCAT TACAATTAGG GCTGGAATAT AACTATATCG ATGCCGAATT TACCGATGGA
TTGAATGATG GCAAGAAATT GTCTTGGGTG GCGGAGCACT CCGGGCGCGG TTATGTCAGT
ATGGATGTTG CGGAGCATAT CCAACTGTTT GCAGAGGCGA TTTACACGGG CGAGCGTTTC
GTCGAAGGCG ATAATGCTAA CCAAGGCGAA AAACTTGCTA GCTATGTGCT TGGTAATCTT
GCCCTTAACT ATAGCCGTGA TGCTTGGCTT GCGAGCTTAC GTATCGATAA CCTGTTTGAT
AAAGACTATG TTAGCTCAGG TTATTATGGT GGCAACTGGG GTGACGGCTA TTACTCAGGC
CGAGGCCGTG ATATTCGCTT GACGGTAGGT TACCGCTTCT AA
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| Protein sequence | MGTHPTKIAL LIGSLCSFSI IAPVMAADDT STAKVDEHLV VIGRSDKTPL NIAANVNVID
AAAIEMSGAT NLTDVLRGQS GIQISDNNIG TSFAMRGFSA STAVNNTLIL LDGRRLNNID
IAAPSLNAIP LNLVERVEIL SGSAGVLYGD QAVGGVINIV TKSPENTGGS VQLSGGSFNT
YEGRGDVSGA INKDWRYFLS GSYNQGDNYR QHNANETGSI LGRIQYKTAT DSFFVETSYY
DDDRENPGSL TVDQFKFDPR QSSNKSEYVH EMTTAARSGY QHQLNQNWAL AADLDYSDTL
VSSVNWGAGS HNTRSLLMFS PKALANYSTR QGELNLVTGL DISRGKADYD SMARSNVQDM
QSAYLQATVP LSHTLSYVVG GRYARVTDEL VDGNVYPNGI DLDEDATAFE FGLNYRPSAE
HRFYLRGDEN FRFAKVDEQA YTPKDVFGLK PQTGRSYEAG WDWTVASQSL RVSLYRLDLE
DEIVFDPSAE KPVGGSFQGA NVNADASRRY GASADWDWQV TQALQLGLEY NYIDAEFTDG
LNDGKKLSWV AEHSGRGYVS MDVAEHIQLF AEAIYTGERF VEGDNANQGE KLASYVLGNL
ALNYSRDAWL ASLRIDNLFD KDYVSSGYYG GNWGDGYYSG RGRDIRLTVG YRF
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