| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0525 |
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| Symbol | |
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| ID | 1168395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 548245 |
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| End bp | 549864 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342519 |
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| Product | drug resistance transporter, EmrB/QacA family protein |
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| Protein accession | NP_716161 |
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| Protein GI | 24372119 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCG TCGGAGCTGA CACTGCACCT GCAATGGCGA TAGCGGCAAC AGTTAGTGCG
CCGAGTGCAT ACGAGCGCGG CAGTCGCCAT TCATGGATTG CTGTTTTTGG TGGTTTGATT
GGCGCCTTTA TGGCGATCCT CGATATTCAA ATTACCAATG CCTCGATGAA GGAAATTCAA
GGTAGCCTTG GGGCTACGCT TGAAGAAGGC AGCTGGATTT CAACGGCGTA TCTGGTTGCT
GAGATGATCG CTATTCCGCT CTCAGGGTGG CTAAGTACAG GGTTGTCGGT ACGGCGTTAT
CTACTGTGGA CAACCGCGGC TTTTATTTTT GCTTCCATTC TTTGTTCTAT CTCGTGGAAC
TTGGAGTCCA TGATTGCTTT TCGTGCGCTG CAGGGCTTTT TTGGTGGCGC ACTTATCCCT
TTGGCATTTC GGCTGATCTT AGAGTTTTTA CCCGAGAATA AACGTGCAGT GGGGATGGCG
CTCTTTGGCG TGACGGCAAC CTTTGCGCCC TCGATTGGCC CAACCTTAGG CGGTTGGTTA
ACTGAGCACT TTAGTTGGCA TTATCTGTTT TATATCAACG TGCCGCCCGG TCTATTGGTG
ATGGCGATGT TGGCCTATGG TCTCGAAAAA CGGCCTGTGG TGTGGGACAA ACTGAAAAAT
GCTGACCTTG CTGGCATTGT CACTATGGCG CTGGGGATGG GTTGCCTTGA GGTGGTGCTT
GAGGAGGGAA ACCGTAAAGA TTGGTTCGGT TCGGATCTCA TCCGCAACCT TGCCATCATC
GCCGCAGTGA ATTTAGTACT TTTTGTGTGG ATCCAACTCA ACCGTAAAGA TCCTTTAGTC
AATTTACGTC TGCTGGGTAA ACGTGATTTT GTGCTTTCAA CCGTGGCGTA CTTTTTACTG
GGGATGGCGC TCTTTGGCGC GATCTATTTA ATCCCACTGT ATTTATCGCA AGTCCATGAT
TACACTCCGC TGGAAATTGG CGAGGTGATT ATGTGGATGG GATTCCCGCA GCTACTCGTT
TTGCCATTAG TACCGCGTTT AATGCAGCGT TTCGATGGTC GTTACTTGGC CGCCTTTGGC
TTTTTTATGT TTGCCTTAAG CTATTACATG AACAGCCAAA TGACCGCCGA TTACGCTGGG
CAGCAGATGA TTGCCTCCCA AGTAGTACGC GCCTTAGGCC AGCCCTTTAT CTTAGTGCCT
ATTGGTATGC TCGCGACCGC GCATTTAAAA CCCCATGAAA ACCCATCGGC CTCAACGGTG
TTAAATGTGA TGCGCAATTT AGGCGGCGCC TTTGGTATCG CGCTCGTTGC GACCTTAACC
GATAATCTAT CCCGCAGTCA TTTGGCCCAT GTGAAGGAGT CTTTGCCTGC GGTTAGTGCT
CAGGCACAGG ATTATTTAAA CCAGAGCGCG AGTTTGCTGC AGATGGGGGG CTCTGATCCT
TACACCGCCG CTGCGCAGGC TAAGGCATTA TTGGCGAAAA CCATGAGTCA GCAGGCGTAT
ATACAAGCCT ATAATGATGT GTTTTTTATT ATGGGAGCCT TGTTGCTAAT TGCCGTAGTG
GCGGTGCTAC TCATTCGTAA ACCCCAGAGC CAAGCGGCCC ATGATGCGGT AATCGATTAA
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| Protein sequence | MSAVGADTAP AMAIAATVSA PSAYERGSRH SWIAVFGGLI GAFMAILDIQ ITNASMKEIQ
GSLGATLEEG SWISTAYLVA EMIAIPLSGW LSTGLSVRRY LLWTTAAFIF ASILCSISWN
LESMIAFRAL QGFFGGALIP LAFRLILEFL PENKRAVGMA LFGVTATFAP SIGPTLGGWL
TEHFSWHYLF YINVPPGLLV MAMLAYGLEK RPVVWDKLKN ADLAGIVTMA LGMGCLEVVL
EEGNRKDWFG SDLIRNLAII AAVNLVLFVW IQLNRKDPLV NLRLLGKRDF VLSTVAYFLL
GMALFGAIYL IPLYLSQVHD YTPLEIGEVI MWMGFPQLLV LPLVPRLMQR FDGRYLAAFG
FFMFALSYYM NSQMTADYAG QQMIASQVVR ALGQPFILVP IGMLATAHLK PHENPSASTV
LNVMRNLGGA FGIALVATLT DNLSRSHLAH VKESLPAVSA QAQDYLNQSA SLLQMGGSDP
YTAAAQAKAL LAKTMSQQAY IQAYNDVFFI MGALLLIAVV AVLLIRKPQS QAAHDAVID
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