| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0484 |
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| Symbol | nrfD |
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| ID | 1168356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 507756 |
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| End bp | 508691 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342480 |
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| Product | formate-dependent nitrite reductase, nrfD protein |
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| Protein accession | NP_716120 |
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| Protein GI | 24372078 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTA CCCTAGGACT CTCCCAAGGC GTTGCTTGGC CTTGGCCGAT TGCAGTGTAT
TTGTTTTTCG CGGGGATTTC GGGCGGGGCG TTAACCATTG CGCTGGCACT GCGTTTTTAC
TTAGGTCAGG TGGAAAATAC CGCCTTCTTA AAAGCGGCGA CCCTGCTGTC CTTTGTCACC
ATTAGCTTAG GGATGTTATG TCTAGTTCTT GACTTAACTA ACCCCTTATT CTTCTGGCGA
ATTTTGGTGT TCTATAACTT AAATTCTGTG ATGTCAATTG GTGTTATTGC GCTGTCGGTG
TATATCCCGT TAGTCGCAGT AGTCGCTCTT TTAGCCCTCG AAAAAGAGCT GATGGCCATC
CCACAATTGA AGTTCTTAGC GCCGATTATT GCCAAGTTAA AAGGCTTTAG ACGGCCAATG
GAAGCGCTCG CGTTAGTGCT GGCGTTATCT GTGTGTGCTT ACACTGGTTT CTTGATTTCA
GCGCTGATCC GCTTCCCGCT GATCAACACC TCGGTACTCC CAGCGCTATT TATTGCCTCG
GGTCTATCTG CGGGTGGAGC TTCAGCCAAA ATGCTGGCGG TATGGTTATT TAAAGAACCC
CTGCACAGCG GTGAAATGAA GATTCTGCAC GGTGCTGAGT GGCCAATTAT GTTCGCCGAA
GCCATGTTTA TTTTCATGAT CGCGACAGCG TTGTTAACTG GTAATGCGGG TGGTCAATTT
GCCTTTGCCG CCTTCCATGA AGGTGTGTGG GCAAGCGTAT TCTGGATTGG TGTCGTGGGT
ATCGGCTTTG CCGCGCCACT GCTACTCAAT TTTGCGACGG GTAAACATTT TAGTCATTCG
GCCAAAGCGT TTTATATGTC GGGAATGTGT GCGGTAGTGG GGATGATGTG TCTACGACTC
TTTATCCTGT TAGCTGGCCA AAATTACGCG ATTTAG
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| Protein sequence | MDFTLGLSQG VAWPWPIAVY LFFAGISGGA LTIALALRFY LGQVENTAFL KAATLLSFVT
ISLGMLCLVL DLTNPLFFWR ILVFYNLNSV MSIGVIALSV YIPLVAVVAL LALEKELMAI
PQLKFLAPII AKLKGFRRPM EALALVLALS VCAYTGFLIS ALIRFPLINT SVLPALFIAS
GLSAGGASAK MLAVWLFKEP LHSGEMKILH GAEWPIMFAE AMFIFMIATA LLTGNAGGQF
AFAAFHEGVW ASVFWIGVVG IGFAAPLLLN FATGKHFSHS AKAFYMSGMC AVVGMMCLRL
FILLAGQNYA I
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