Gene SNSL254_pSN254_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0068 
Symbol 
ID4929543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand+ 
Start bp51795 
End bp52424 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID642572372 
Productputative type IV conjugative transfer system coupling factor 
Protein accessionYP_001101947 
Protein GI134047224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC CGTGGTTGCT GGTCGCATGG CTGCTGGTTA TTGAGTTGCT GGCAATATTG 
CTGCTGATCC CTGGCGACTG GACAGACAGA GCCATCAAAA GGGAATCCGA GCTGGTGGAA 
CAGAGTCTTG GTGTCGAAGC AAGAGACTGG ATACAGAACA AAGCATCTAC CTGGTTCAGG 
TCGAGCGTTA TTGATTCAGG ATTCTATGAG GGGATGTACC AAACGCTGAT CCCATCAGAA 
GAGGAGCGCC AGAAGTCCAA GGGGATGCAG GACATGGGCA AGGGCTGGTT TGTGTGGGTC 
AAAGGCCGCA TGGAAGCCTT TGTCAACGTC ATTTACCAGT TCTACACAAG GTTGGCACTG 
TTAGCCGCGT GGGCTCCCTA TATGCTGATC CTGTTCGTAC CTGCGGTATA TGACGGGATG 
ATGACATGGC GAATTAAGCG GACCAACTTC GATTATGCGA GTCCGGTTCT CCATCGTTAC 
AGCGTTCGCG GAACGATGTA CCTGATGGCC GGATTGTTCA TCGCGTTCTT CATCCCCATA 
GCGCTCGATC CGGTTGTCAT CCCGATGACA ATGATGACGT GCTGTGTCCT GGTTGGCCTG 
ACGTTCGGCA ACCTCCAGAA ACGGGTATAG
 
Protein sequence
MKKPWLLVAW LLVIELLAIL LLIPGDWTDR AIKRESELVE QSLGVEARDW IQNKASTWFR 
SSVIDSGFYE GMYQTLIPSE EERQKSKGMQ DMGKGWFVWV KGRMEAFVNV IYQFYTRLAL 
LAAWAPYMLI LFVPAVYDGM MTWRIKRTNF DYASPVLHRY SVRGTMYLMA GLFIAFFIPI 
ALDPVVIPMT MMTCCVLVGL TFGNLQKRV