Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4378 |
Symbol | |
ID | 6483822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4251216 |
End bp | 4251563 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739620 |
Product | baseplate assembly protein W |
Protein accession | YP_002043314 |
Protein GI | 194443600 |
COG category | [R] General function prediction only |
COG ID | [COG3628] Phage baseplate assembly protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.51911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0000024213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGCGC GTTATCTGGG GATGAACCGC AATACCGGCC TCGCTATCAG TGACAGTGAG CATATCAGCC AGAGCATGCG CGACATTCTG CTGACGCCGG TCGGCTCGCG GGTAATGCGT CGTGAATATG GCTCGCTCCT GTCTGCGCTG ATTGATATGC CGCAAAACCC GGCGCTCAGG CTACAAATCA TGGTGGCGTG CTATTCCGCG ATCCAGAAAT GGGAACCACG CATCAGGCTT ACCTCAATCA GCTTTGAGCG TGGCGACACT GGCGAAATGT ATGTCGATAT TACCGGGATG CGTACCGATA CCGGTGCGTC AGTTTCAACC ACTGTTTCAC TGAGTTAA
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Protein sequence | MTARYLGMNR NTGLAISDSE HISQSMRDIL LTPVGSRVMR REYGSLLSAL IDMPQNPALR LQIMVACYSA IQKWEPRIRL TSISFERGDT GEMYVDITGM RTDTGASVST TVSLS
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