Gene SNSL254_A4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4378 
Symbol 
ID6483822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4251216 
End bp4251563 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content55% 
IMG OID642739620 
Productbaseplate assembly protein W 
Protein accessionYP_002043314 
Protein GI194443600 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.51911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0000024213 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGCGC GTTATCTGGG GATGAACCGC AATACCGGCC TCGCTATCAG TGACAGTGAG 
CATATCAGCC AGAGCATGCG CGACATTCTG CTGACGCCGG TCGGCTCGCG GGTAATGCGT
CGTGAATATG GCTCGCTCCT GTCTGCGCTG ATTGATATGC CGCAAAACCC GGCGCTCAGG
CTACAAATCA TGGTGGCGTG CTATTCCGCG ATCCAGAAAT GGGAACCACG CATCAGGCTT
ACCTCAATCA GCTTTGAGCG TGGCGACACT GGCGAAATGT ATGTCGATAT TACCGGGATG
CGTACCGATA CCGGTGCGTC AGTTTCAACC ACTGTTTCAC TGAGTTAA
 
Protein sequence
MTARYLGMNR NTGLAISDSE HISQSMRDIL LTPVGSRVMR REYGSLLSAL IDMPQNPALR 
LQIMVACYSA IQKWEPRIRL TSISFERGDT GEMYVDITGM RTDTGASVST TVSLS