Gene SNSL254_A2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2834 
Symbol 
ID6482252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2768187 
End bp2769071 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID642738157 
Productreplication protein O 
Protein accessionYP_002041890 
Protein GI194442986 
COG category 
COG ID 
TIGRFAM ID[TIGR01610] phage replication protein O, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.119993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.314144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA CTGCTGAAGT AATCAATTTT CCTGTGCCTG ACGTGGCACA TAAGGAGCCG 
CGCGTGGCAG ATCTCGATGA TGGGTTTACG CGCATCGCCA ATGAGATCCT TGAGGCTGTA 
ATGCATGCAG GTTTGTCGCA GCATCAGCTT TTGGTGTTCA TGGCTGTCAT GCGCAAAACA 
TACGGCTTCA ATAAGAAATC TGACTGGGTC AGTAACGAGC AGCTCTCGGA GCTGACCGGC 
ATTCTCCCTC ATAAGTGCTC ATCTGCAAAA AGCGCCCTGG TTAAGCGGGG GATATTAACT 
CAAACCGGTC GTGTTATCGG GATTAATAAA ACGGTCAGCG AATGGTCATC TTTACCTGTA 
AAAGGTACAG AAAAAAAACC TTACCTGGAA AAGGTAAATT TACCCGAATC AGGTAAGAAA 
AGTTTACCCG AATCAGGTAA GAAAAGTTTA CCCGAATCAG GTAAGAAAAG TTTACCCGAA 
TCAGGTAACG GCTATTACCC AAATCAGGTA AACACAAAAG ACACTATTAC AAAAGACAGT 
AAAGACAATA GTAATAAACC CCCTAAACCC CCCCGGGCGG TTTCGTTCGA TGCATCAAGT 
GTTCAGTTGC CTGACTGGCT GTCTTCGATC ATCTGGTCTT CATGGGTTGA ATACCGCCGT 
GACCTGAAAA AGCCGATCAA GTCTCAGCAG ACCGTGACGC AGGCTATCAA CCTGCTTGAC 
CGCTGCAGGC TGAACGGATA CACACCTGAA GAAATTATTA ACCGCAGTAT TGCGAATGGC 
TGGCAGGGTC TGTTCGAACC TGACGGACAG GCGAAGCGCA GCAGAGATAC CGATCAGGAA 
AGTATCCACT GGAACAGCCC GGATGCATGG AGGGATTTCC TATGA
 
Protein sequence
MANTAEVINF PVPDVAHKEP RVADLDDGFT RIANEILEAV MHAGLSQHQL LVFMAVMRKT 
YGFNKKSDWV SNEQLSELTG ILPHKCSSAK SALVKRGILT QTGRVIGINK TVSEWSSLPV 
KGTEKKPYLE KVNLPESGKK SLPESGKKSL PESGKKSLPE SGNGYYPNQV NTKDTITKDS 
KDNSNKPPKP PRAVSFDASS VQLPDWLSSI IWSSWVEYRR DLKKPIKSQQ TVTQAINLLD 
RCRLNGYTPE EIINRSIANG WQGLFEPDGQ AKRSRDTDQE SIHWNSPDAW RDFL