Gene SNSL254_A1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1981 
Symbol 
ID6485071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1936040 
End bp1936831 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content50% 
IMG OID642737347 
Producttranscriptional regulator KdgR 
Protein accessionYP_002041097 
Protein GI194444760 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.364283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0913734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG CAGATCTGGA TAAGCAGCCT GATTCTGTAT CTTCTGTGCT GAAAGTTTTC 
GGCATTCTGC AGGCGCTGGG TGAAGAGCGT GAAATAGGGA TTACCGAGCT ATCGCAGCGC 
GTCATGATGT CGAAAAGCAC CGTTTATCGC TTTTTGCAAA CCATGAAAAC GCTGGGCTAC 
GTGGCTCAGG AGGGGGAGTC TGAAAAATAC TCTCTGACGC TAAAGCTGTT TGAGCTGGGC 
GCGCGAGCGT TGCAAAATGT TGATCTCATC CGCAGTGCGG ACATTCAGAT GCGCGAACTG 
TCTCGTCTGA CAAAAGAAAC TATCCATCTT GGCGCGCTGG ATGAAGACAG CATTGTCTAT 
ATCCATAAAA TTGACTCTAT GTACAATCTG CGGATGTACT CACGTATTGG GCGTCGTAAT 
CCGCTGTACA GTACGGCCAT CGGTAAAGTG CTTCTGGCCT GGCGCGACCG TGATGAGGTT 
AAGCAGATTC TCGACGGCGT AGAGTATAAG CAAAGCACGG GACGCACGAT TACCAGCACT 
GAAGCGTTGC TGCCGCTGTT GGATGAAGTG CGTGCGCAAG GATACGGTGA AGATAACGAA 
GAACAGGAAG AAGGATTACG TTGTATCGGC GTACCGGTAT TTGACCGTTT TGGCGTAGTC 
ATCGCAGGGT TAAGCATTTC GTTCCCGACG CTGCGTTTTT CAGAAGAACG CCTACAGGAA 
TATGTGGCTA TGTTACACGC CGCCGCGCGT AAAATTTCTG AACAAATGGG TTACAACGAT 
TATCCCTTCT AA
 
Protein sequence
MANADLDKQP DSVSSVLKVF GILQALGEER EIGITELSQR VMMSKSTVYR FLQTMKTLGY 
VAQEGESEKY SLTLKLFELG ARALQNVDLI RSADIQMREL SRLTKETIHL GALDEDSIVY 
IHKIDSMYNL RMYSRIGRRN PLYSTAIGKV LLAWRDRDEV KQILDGVEYK QSTGRTITST 
EALLPLLDEV RAQGYGEDNE EQEEGLRCIG VPVFDRFGVV IAGLSISFPT LRFSEERLQE 
YVAMLHAAAR KISEQMGYND YPF