Gene SNSL254_A1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1101 
Symbol 
ID6482322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1109148 
End bp1110257 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content56% 
IMG OID642736504 
ProductMOSC domain protein 
Protein accessionYP_002040263 
Protein GI194444212 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0633] Ferredoxin
[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0241324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.840563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACGT TATCACGGCT CTTTATTCAT CCGGTCAAAT CCATGCGCGG CATTGGCCTG 
ACTCATGCGC TGGCAGATAT CAGCGGCCTG GCTTTTGATC GCATCTTCAT GGTGACCGAG
CCTGACGGCA CATTTATTAC CGCCCGCCAG TTTCCACAAA TGGTACGTTT TACCCCCTCT
CCCTTACACG ACGGCCTCCA TTTGACCGCG CCAGACGGCA GTAGCGCGCT GGTTCGCTTT
ACGGATTTCA CCCCGCAGGA TGCGCCGACC GAGGTCTGGG GAAACCATTT TACCGCTCGC
GTCGCCCCGA CGGCGATTAA TCAATGGTTG AGCGGCTTTT TCTCCCGCGA TGTCCAGTTG
CGCTGGGTTG GGCCGCAGTT GACACGCCGG GTCAAACGAC ATAACGCGGT GCCGCTGGGA
TTTGCCGATG GCTACCCGTA TTTATTGACC AACGAAGCCT CGCTGCGCGA TCTGCAACAG
CGTTGTCCGG CAGGCGTACA AATGGAACAA TTTCGCCCAA ACTTAGTGGT TTCCGGCGTA
GCGGCCTGGG AGGAAGATAG CTGGAAAGTG CTTCGCATTG GCGATGTGAT TTTTGACGTC
GTGAAGCCCT GTAGCCGCTG TATTTTTACG ACCGTCAGCC CTGAAAAGGG GCAAAAACAT
CCTTCCGGCG AACCGCTGGC GACACTGCAA GCTTTTCGTA CCGCCCAGGA CAATGGCGAT
GTGGATTTCG GTCAGAATTT GATTGCCCGC AATAGCGGCG TCATTCGCGT CGGCGATGAG
GTGGAGATAC TGGCGACAGC GCCGGCAAAA GCTTATGGCG CCACAACGCT CGACGACAGC
GTTACGCCAG AGAAACATCC GGACGGGAGT GTAACCATCG ACTGGCAGGG GCAAACCTTC
TGCGGGAATA ATCAACAGGT GCTACTGGAA CAGTTGGAGA ATCAGGGAAT TCGTATTCCG
TATTCTTGCC GGGCTGGTAT CTGTGGTTGC TGCCGGATAC GTTTGCTGGA AGGCGAAGTA
AGTCCGCTGA AAAAATCGGC TATGGGTGAC GATGGTACGA TTCTGAGCTG TAGCTGCGTG
CCTAAGACCG CGTTACGACT GGAGAATTAA
 
Protein sequence
MATLSRLFIH PVKSMRGIGL THALADISGL AFDRIFMVTE PDGTFITARQ FPQMVRFTPS 
PLHDGLHLTA PDGSSALVRF TDFTPQDAPT EVWGNHFTAR VAPTAINQWL SGFFSRDVQL
RWVGPQLTRR VKRHNAVPLG FADGYPYLLT NEASLRDLQQ RCPAGVQMEQ FRPNLVVSGV
AAWEEDSWKV LRIGDVIFDV VKPCSRCIFT TVSPEKGQKH PSGEPLATLQ AFRTAQDNGD
VDFGQNLIAR NSGVIRVGDE VEILATAPAK AYGATTLDDS VTPEKHPDGS VTIDWQGQTF
CGNNQQVLLE QLENQGIRIP YSCRAGICGC CRIRLLEGEV SPLKKSAMGD DGTILSCSCV
PKTALRLEN