22 homologs were found in PanDaTox collection
for query gene SNSL254_A0830 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A0830  oxaloacetate decarboxylase subunit gamma  100 
 
 
68 aa  130  3.9999999999999996e-30  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3545  oxaloacetate decarboxylase subunit gamma  88.24 
 
 
80 aa  110  6e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3713  oxaloacetate decarboxylase subunit gamma  83.82 
 
 
80 aa  107  7.000000000000001e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0062  oxaloacetate decarboxylase subunit gamma  82.35 
 
 
79 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0061  oxaloacetate decarboxylase subunit gamma  82.35 
 
 
79 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.493404 
 
 
-
 
NC_011205  SeD_A0061  oxaloacetate decarboxylase subunit gamma  82.35 
 
 
79 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.979623  normal  0.547366 
 
 
-
 
NC_011149  SeAg_B3544  oxaloacetate decarboxylase subunit gamma  80.88 
 
 
80 aa  102  1e-21  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0802  oxaloacetate decarboxylase subunit gamma  92.31 
 
 
69 aa  92.8  1e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3616  oxaloacetate decarboxylase subunit gamma  83.82 
 
 
80 aa  89.7  1e-17  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.384488  normal 
 
 
-
 
NC_011149  SeAg_B0063  oxaloacetate decarboxylase subunit gamma  82.35 
 
 
79 aa  89  2e-17  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0861  oxaloacetate decarboxylase subunit gamma  96.92 
 
 
69 aa  87.8  4e-17  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0893  oxaloacetate decarboxylase subunit gamma  81.54 
 
 
68 aa  86.3  1e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3651  oxaloacetate decarboxylase subunit gamma  80.36 
 
 
80 aa  83.6  8e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0060  oxaloacetate decarboxylase subunit gamma  76.79 
 
 
79 aa  80.9  0.000000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.130142  normal 
 
 
-
 
NC_008309  HS_0201  oxaloacetate decarboxylase subunit gamma  49.23 
 
 
85 aa  61.2  0.000000004  Haemophilus somnus 129PT  Bacteria  normal  0.41736  n/a   
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  47.83 
 
 
83 aa  52.8  0.000002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
-
 
NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  50.77 
 
 
80 aa  51.2  0.000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1305  ribonuclease D  47.76 
 
 
80 aa  48.5  0.00003  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00021107  normal  0.0271144 
 
 
-
 
NC_007575  Suden_1260  pyruvate carboxylase/oxaloacetate decarboxylase gamma subunit  40 
 
 
79 aa  46.6  0.0001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.406933  n/a   
 
 
-
 
NC_009457  VC0395_A0321  putative oxaloacetate decarboxylase, gamma subunit  40.58 
 
 
112 aa  46.2  0.0002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  35.71 
 
 
92 aa  42.4  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  36.36 
 
 
85 aa  41.2  0.005  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
-
 
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