Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0544 |
Symbol | |
ID | 6483185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 554747 |
End bp | 556423 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642735962 |
Product | putative cation:proton antiport protein |
Protein accession | YP_002039736 |
Protein GI | 194445784 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.890116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCACG CTACCCCGCT TATCACCACC ATTGTCGGCG GCCTTGTGCT CGCTTTTATT CTCGGCATGA TTGCCAACAA ATTGCGTATT TCTCCACTGG TGGGATATCT GTTAGCGGGC GTTCTGGCGG GACCTTTTAC CCCGGGTTTT GTTGCGGATA CCAAACTGGC GCCGGAGCTG GCGGAGCTCG GCGTGATTCT ATTGATGTTC GGCGTCGGGC TGCATTTTTC GCTGAAGGAT TTGATGGCGG TAAAGTCTAT CGCCATTCCC GGCGCTGTCG CTCAGATAGC GGTGGCGACG CTGCTGGGTA TGGCGCTTTC CGCCGTGCTG GGATGGTCAT TAATGACCGG CATCGTTTTT GGGCTCTGTC TGTCTACCGC CAGTACCGTC GTCCTGCTGC GCGCGCTTGA GGAGCGACAA CTCCTTGATA GCCAGCGCGG GCAAATCGCC ATCGGCTGGC TGATTGTCGA AGATCTGGTG ATGGTGCTGA CGCTGGTCTT GCTGCCCGCC GTTGCCGGCA TGGTGGAAAA AGGCGATGTC GGCATAGCCT CGCTGACGGT CGATATGGGG ATAACCATTG GTAAAGTGGT GGCGTTTATC GCCATCATGA TGCTGGTCGG ACGCCGCCTG GTGCCGTGGA TTATGGCCCG CAGCGCCGCC ACCGGCTCGC GCGAATTATT TACCCTTTCC GTACTGGCGC TGGCGTTAGG CATTGCGTTT GGCGCGGTAG AACTGTTTGA CGTCTCTTTT GCGCTGGGCG CGTTCTTCGC TGGAATGGTG CTTAATGAGT CGGAACTGAG TCACCGGGCG GCGCACGATA CGTTGCCGCT GCGCGACGCC TTTGCCGTCC TGTTTTTTGT TTCCGTCGGC ATGTTGTTCG ATCCGTTAGT CTTGATTCAA CAGCCGCTGG CGGTGCTGGC GACGCTTGCC ATTATCGTCT TTGGCAAATC GATCGCTGCG TTTTTCCTGG TGCGTATGTT CGGCCACTCG CCGCGAACCG CGCTGACCAT TGCCGCCAGC CTGGCGCAAA TCGGCGAGTT CGCCTTTATT CTCGCCGGAC TCGGCATGGC GCTCAACCTG CTGCCGCAAG CGGGACAGAA CCTGGTGCTG GCAGGTGCTA TTTTGTCGAT TATGCTTAAT CCCGTACTGT TTACCCTGCT GGAGAAGTAT CTGGCGAAAA CCGAAACGCT GGAAGAGCAA ACGCTGGAAG AGGCTATCGA AGAAGAGAAG CAAATTCCTG TGGATATCTG TAATCATGCC CTGCTGGTGG GTTTTGGCCG CGTAGGCAGT CTGCTGGGAG AAAAATTACT GGCGGCGGGG ATTCCGCTGG TGGTTATCGA AACGTCCCGT ACCCGCGTGG ATGAACTGCG CGAACGCGGG ATTCGCGCCG TGCTGGGCAA CGCCGCTAAC GAAGAAATCA TGAATCTGGC GCATCTGGAC TGCGCCCGCT GGCTGTTATT GACCATCCCC AACGGTTACG AAGCCGGTGA GATTGTCGCC TCAGCGCGAG AAAAAAGCCC TGATATCGAG ATAATCGCCC GCGCGCACTA TGATGATGAA GTGAAATATA TTACCGAGCG GGGAGCCAAT CAGGTAGTGA TGGGCGAGCG AGAAATTGCC CGGGCGATGT TGGAACTGCT TGAAACGCCG CCCGCAGGTG AAGTCGTCGC CAGTTAA
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Protein sequence | MHHATPLITT IVGGLVLAFI LGMIANKLRI SPLVGYLLAG VLAGPFTPGF VADTKLAPEL AELGVILLMF GVGLHFSLKD LMAVKSIAIP GAVAQIAVAT LLGMALSAVL GWSLMTGIVF GLCLSTASTV VLLRALEERQ LLDSQRGQIA IGWLIVEDLV MVLTLVLLPA VAGMVEKGDV GIASLTVDMG ITIGKVVAFI AIMMLVGRRL VPWIMARSAA TGSRELFTLS VLALALGIAF GAVELFDVSF ALGAFFAGMV LNESELSHRA AHDTLPLRDA FAVLFFVSVG MLFDPLVLIQ QPLAVLATLA IIVFGKSIAA FFLVRMFGHS PRTALTIAAS LAQIGEFAFI LAGLGMALNL LPQAGQNLVL AGAILSIMLN PVLFTLLEKY LAKTETLEEQ TLEEAIEEEK QIPVDICNHA LLVGFGRVGS LLGEKLLAAG IPLVVIETSR TRVDELRERG IRAVLGNAAN EEIMNLAHLD CARWLLLTIP NGYEAGEIVA SAREKSPDIE IIARAHYDDE VKYITERGAN QVVMGEREIA RAMLELLETP PAGEVVAS
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