| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2461 |
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| Symbol | |
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| ID | 3240723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2514048 |
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| End bp | 2516321 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637169135 |
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| Product | CRISPR-associated Csm1 family protein |
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| Protein accession | YP_190004 |
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| Protein GI | 57865884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0456597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AAAATATATT AATGTATGGC TCTTTATTAC ATGATATAGG GAAAATTATA
TATCGAAGTG GTGATCATAC ATTTTCAAGA GGTACGCATT CAAAATTAGG TCATCAATTT
TTGTCCCAAT TTTCAGAATT TAAAGACAAC GAAGTGCTTG ATAACGTTGC TTATCATCAT
TACAAAGAAC TCGCAAAAGC TAATTTAGAT AATGATAATA CAGCTTATAT TACCTATATT
GCGGATAATA TTGCGAGTGG TATTGATAGA AGAGATATTA TAGAAGAAGG CGATGAAGAA
TACGAAAAAC AACTATTTAA TTTTGATAAA TATACACCGC TATATAGTGT GTTTAATATT
GTGAATTCTG AAAAATTGAA ACAAACAAAC GGGAAGTTTA AATTTTCTAA TGAAAGTAAT
ATTGAATATC CTAAAACTGA AAACATTCAA TATTCAAGTG GAAATTATAC AACATTAATG
AAAGATATGA GTCATGATTT AGAGCACAAA TTAAGTATTA AAGAAGGTAC ATTTCCTTCA
TTATTACAAT GGACGGAAAG TCTATGGCAA TATGTACCTA GTTCGACAAA TAAAAACCAA
TTAATTGATA TTTCTCTTTA TGATCATAGT CGTATTACAT GTGCCATCGC CAGTTGTATA
TTTGATTATT TAAATGAAAA TAACATACAT AATTACAAAG ATGAATTGTT CTCAAAGTAT
GAAAATACCA AATCATTTTA TCAAAAAGAA GCTTTTTTAC TACTTAGTAT GGATATGAGT
GGTATTCAAG ATTTTATTTA CAATATAAGC GGTTCTAAAG CATTAAAGAG TCTAAGATCT
CGTAGTTTTT ATTTAGAACT CATGCTTGAA GTAATCGTTG ATCAATTATT AGAAAGATTA
GAATTAGCAC GAGCAAATCT TTTGTATACA GGTGGTGGCC ATGCTTATTT ATTAGTGTCT
AATACTGATA AAGTGAAGAA AAAAATAACT CAATTTAATA ATGAATTAAA AAAATGGTTT
ATGTCAGAAT TTACTACAGA TCTTTCATTA TCAATGGCTT TTGAAAAATG TAGTGGCGAT
GATTTAATGA ATACAAGTGG TAATTATAGA ACTATTTGGC GTAATGTTAG CAGCAAACTT
TCTGATATTA AAGCGCATAA ATATTCCGCG GAAGATATAT TAAAATTAAA TCATTTTCAT
TCGTATGGAG ATCGGGAATG TAAAGAATGT TTAAGAAGTG ACATAGATAT TAATGATGAT
GGACTATGTA GTATATGTGA AGGAATTATT AATATATCAA ATGATTTAAG AGATAAATCA
TTCTTTGTAC TGTCAGAAAC TGGAAAATTA AAAATGCCAT TCAATAAATT TATATCGGTT
ATTGATTATG AAGAGGCAGA AATGTTAGTA CAAAATAATA ATCAAGTTCG TATTTACAGT
AAAAATAAAC CATATATAGG CATAGGAATA TCAACAAATT TATGGATGTG TGATTACGAC
TATGCTAGTC AAAATCAAGA TATGAGAGAA AAAGGTATTG GAAGTTATGT AGATAGAGAA
GAAGGGGTTA AGCGTTTAGG CGTGGTACGT GCCGATATAG ATAATCTCGG TGCTACATTT
ATATCTGGAA TTCCAGAAAA ATATAATTCA ATTTCAAGAA CAGCTACATT GTCTCGTCAA
TTATCATTAT TTTTTAAATA CGAATTAAAT CATTTATTAG AAAATTATCA AATTACTGCT
ATATATTCAG GCGGTGACGA TTTATTTTTA ATCGGTGCAT GGGATGACAT TATAGAAGCA
AGCATTTATA TAAATGACAA ATTTAAAGAG TTTACTCTTG ATAAACTAAC ATTGTCTGCC
GGGGTTGGAA TGTTTAGTGG TAAGTACCCA GTTTCTAAAA TGGCTTTTGA GACAGGACGA
CTTGAAGAAG CGGCTAAGAC TGGTGAAAAA AATCAGATAT CTCTTTGGTT ACAAGAAAAA
GTATATAACT GGGATGAGTT TAAAAAGAAT ATCTTAGAAG AAAAACTTCT CGTTTTACAA
CAGGGGTTTT CTCAAACAGA TGAACACGGG AAAGCCTTCA TTTATAAAAT GCTCGCTTTA
CTGAGAAATA ATGAAGCTAT TAATATTGCT CGTTTAGCTT ACTTATTAGC AAGAAGCAAG
ATGAATGAGG ATTTTACGTC TAAAATTTTT AATTGGGCTC AAAACGACAA AGATAAAAAT
CAATTAATTA CAGCGTTAGA GTATTATATT TATCAAATAA GGGAGGCTGA TTGA
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| Protein sequence | MNKKNILMYG SLLHDIGKII YRSGDHTFSR GTHSKLGHQF LSQFSEFKDN EVLDNVAYHH
YKELAKANLD NDNTAYITYI ADNIASGIDR RDIIEEGDEE YEKQLFNFDK YTPLYSVFNI
VNSEKLKQTN GKFKFSNESN IEYPKTENIQ YSSGNYTTLM KDMSHDLEHK LSIKEGTFPS
LLQWTESLWQ YVPSSTNKNQ LIDISLYDHS RITCAIASCI FDYLNENNIH NYKDELFSKY
ENTKSFYQKE AFLLLSMDMS GIQDFIYNIS GSKALKSLRS RSFYLELMLE VIVDQLLERL
ELARANLLYT GGGHAYLLVS NTDKVKKKIT QFNNELKKWF MSEFTTDLSL SMAFEKCSGD
DLMNTSGNYR TIWRNVSSKL SDIKAHKYSA EDILKLNHFH SYGDRECKEC LRSDIDINDD
GLCSICEGII NISNDLRDKS FFVLSETGKL KMPFNKFISV IDYEEAEMLV QNNNQVRIYS
KNKPYIGIGI STNLWMCDYD YASQNQDMRE KGIGSYVDRE EGVKRLGVVR ADIDNLGATF
ISGIPEKYNS ISRTATLSRQ LSLFFKYELN HLLENYQITA IYSGGDDLFL IGAWDDIIEA
SIYINDKFKE FTLDKLTLSA GVGMFSGKYP VSKMAFETGR LEEAAKTGEK NQISLWLQEK
VYNWDEFKKN ILEEKLLVLQ QGFSQTDEHG KAFIYKMLAL LRNNEAINIA RLAYLLARSK
MNEDFTSKIF NWAQNDKDKN QLITALEYYI YQIREAD
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