| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1997 |
|---|
| Symbol | |
|---|
| ID | 3242416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2016065 |
|---|
| End bp | 2016886 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637168683 |
|---|
| Product | formate/nitrite transporter family protein |
|---|
| Protein accession | YP_189553 |
|---|
| Protein GI | 57865480 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA ACAACAAAAG TATTGAAGAT ACTTATGCAA CAAAACCTAT TATTCAGAAT
ATCGTTGGTC AGGCACAAAT CAAACAAGTG ATGGCGAAAC AAACACCCAT GAGATATACG
TTGAAAGCTA TCATGGCTGG TTTTCTATTA TCAATAGTTA CAGTTTTTAT GTTAGCAATT
AAAACACAAT TCGCTTCAAC GCATAATGAC GGGTTAATCA ATTTGATGGG AGCTATTGCG
TTTAGTTTAG GTCTCGTATT AGTTGTGTTA ACCAATTCTG AATTATTAAC TAGTAATTTT
ATGTATCTGA CTGTTGGTTG GTATTATAAA GCAATTAGTG TAAGTAAAAT GATATGGATT
TTTATTTTCT GTTTTATAGG TAATATCTTA GGTGGATTTA TTTTATTTTT CCTCATGAAA
TATGCACATG TTATGACGCC AGAAATGACA GATAGTTTAA CAGCATTAGT ACATAAAAAA
ACAGTAGAAT CGACTTGGTT AAATATTTTG ATTAAAGGTA TATTTTGTAA TTTCTTTATT
AATATCGGTA TTTTTATTTC AATGCAGTTT AAAGAGGGAC TAGCCAAAGC ATTCTTTATA
GCTTGTGGAG TGATTGTCTT TGTATTTATG GGTTACGAAC ACGTTGTTTT TAACGCTGGA
TTATATGCAG GTATGATGTT CTTTAATATG GATGGATTAT CTTGGTTGGG TGTGCTAAAA
AATATTGTTT TTGCATTCCT TGGAAACTAT ATCGGTGGAG GTATCTTTAT TGGATTAGTG
TATGCATATT TGAACGGTAA ACGTGACAGC CTCCAACCAT AG
|
|---|
| Protein sequence | MFKNNKSIED TYATKPIIQN IVGQAQIKQV MAKQTPMRYT LKAIMAGFLL SIVTVFMLAI
KTQFASTHND GLINLMGAIA FSLGLVLVVL TNSELLTSNF MYLTVGWYYK AISVSKMIWI
FIFCFIGNIL GGFILFFLMK YAHVMTPEMT DSLTALVHKK TVESTWLNIL IKGIFCNFFI
NIGIFISMQF KEGLAKAFFI ACGVIVFVFM GYEHVVFNAG LYAGMMFFNM DGLSWLGVLK
NIVFAFLGNY IGGGIFIGLV YAYLNGKRDS LQP
|
|---|
| |