Gene SERP1947 details

Gene Information

• Locus tag: SERP1947
• Symbol: tcaB
• ID: 3242454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1961721
• End bp: 1962932
• Gene Length: 1212 bp
• Protein Length: 403 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637168635
• Product: tcaB protein
• Protein accession: YP_189505
• Protein GI: 57865383
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00710] drug resistance transporter, Bcr/CflA subfamily; [TIGR00880] Multidrug resistance protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAGAG TGTATCAGTC AGAAAATCAA TCATTACTTT TTATTGTTAT TTTAGGTTCA 
TTAACAGCAT TTGGCCCATT GGCTATTGAT ATGTTTTTAC CTGGACTACC TAATATTAGT 
CATGATTTTG ATATTTCTGC ATCTACAACT CAGCTTACTA TCTCCTTTTT TATGATTGGA 
TTAGCGTTAG GAAATTTTTT GGCTGGCCCC ATATCTGATA TTACTGGTAG AAAAAAACCA 
TTAATTTTCT CACTGATTAT TTTTACTATT GCGAGTTTAG GTATTATATT CGTCACAAAT 
ATATGGATTA TGATTATTTT ACGATTTATT CAAGGATTAA CTGGTGGTGC AGGTGCAGTC 
ATCTCAAGAG CCATTGCTAG TGATATGTAC TCAGGTAATG CGCTAACTAA ATTTTTATCA 
TTATTAATGC TTGTCAATGG CATTGCGCCA ATTATCGCAC CTGCGCTTGG CGGTATCATT 
TTAAATTATG GGCCATGGCG AATTGTATTT GTAATACTAA CAATGTTTGG GATTGTCATG 
TTAATAGGAA CTTTATTTAA AGTTCCTGAG TCGCTTGAAA AGAGCCTAAG GGAAAGTAGT 
AACATAGGTA CGATGCTAAT TAATTTCAAA GAACTTTTTA AAACACCCCG TTTTGTATTA 
CCCATGTTGA TACAAGGGGT GTCATTTGTA TTACTATTTA CTTATATTTC TGCATCTCCT 
TTTATAGTTC AAACAATTTA TGGTTTAACG CCATTAAACT TCAGTATTAT GTTTGCTTTT 
ATAGGCGTTA CACTCATTAT TTCAAGCCAA TTAACCGGAA AACTTGTTGA CTATATAGAT 
AGATTACTGT TGCTGAGAAT CATGTCTACT ATACAAGTTA TTGGTGTTAT AATCGTATCA 
CTAACTTTAC TCAACCATTG GACTTTTTGG ATACTTTCTT GTGGCTTTGT GATTTTAGTG 
GCACCAGTTA CAGGGATTGC AACGTTAGGA TTTTCGATAG CAATGGATGA GAGTAAAGGG 
GCCAAAGGTA GTTCTTCAAG TTTGTTGGGA TTGTTTCAAA CTTTACTTGG TGGCGTCATC 
TCTCCACTTG TTGGTATTAA GGGAGACAGT AATGCGATAC CTTATATAAT CGTTATCGTT 
ATTACAGCAA TAATTCTTAT GGTTTTACAG TTGATTAATG TGAAGATATT TAAAAAAGCT 
AAAATTCATT GA 

 

Protein sequence

MKRVYQSENQ SLLFIVILGS LTAFGPLAID MFLPGLPNIS HDFDISASTT QLTISFFMIG 
LALGNFLAGP ISDITGRKKP LIFSLIIFTI ASLGIIFVTN IWIMIILRFI QGLTGGAGAV 
ISRAIASDMY SGNALTKFLS LLMLVNGIAP IIAPALGGII LNYGPWRIVF VILTMFGIVM 
LIGTLFKVPE SLEKSLRESS NIGTMLINFK ELFKTPRFVL PMLIQGVSFV LLFTYISASP 
FIVQTIYGLT PLNFSIMFAF IGVTLIISSQ LTGKLVDYID RLLLLRIMST IQVIGVIIVS 
LTLLNHWTFW ILSCGFVILV APVTGIATLG FSIAMDESKG AKGSSSSLLG LFQTLLGGVI 
SPLVGIKGDS NAIPYIIVIV ITAIILMVLQ LINVKIFKKA KIH