| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1769 |
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| Symbol | |
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| ID | 3242173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1813801 |
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| End bp | 1814484 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637168463 |
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| Product | hemolysin III, putative |
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| Protein accession | YP_189333 |
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| Protein GI | 57867682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.664722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCAAT CATCTAAGCG AAAAAACGAT TCTGTGGTAG AAACTTTTAA GGACATCATT
CCTTTAACAT TTGGAGAAGA GATTGGTAAT GCAGCATCAC ATGGTGCTGC TGCATTACTT
ACATTATTTA TTCTTCCATA TGCAGCAGTG CATAGTTTTA ACAATGGTGG CACATTAGAG
TCAATTAGTG TGTCAGTTTA TGTGATTAGT ATTTTTATGA TGTTCATATC ATCAACCATT
TATCATTCAA TGCAAAATAA TACGTCTCAT AAATATATAT TAAGGATTAT TGACCATAGT
ATGATTTATG TGGCTATTTC AGGAACATAC ACACCTGTTT TGTTAAGTGT TGTCGGCGGT
TGGTTAGGTT GGCTCGTGAC AATATTATTA TGGGGAACGA CATTATGGGG GATTTTGTAT
AAATCAATAG CAACTAAAGT CAATCATAGA TTAAGTCTCA TTGTTTATTT GGTGATGGGA
TGGGTAGGTA TCATATTTTT ACCTATTATT ATTATGCGAA CATCATGGTG GTTTATTTTC
TTTATATTTC TTGGTGGGTT ATCTTATACT ATCGGAGCAT GGTTTTATGC CCAAAAAAAT
AAACCTTATT TTCATATGAT TTGGCATATA TTTATTGTTC TTGCTTCTTT CTTACATATG
ATAGGCATTT TTTATTTTAT GTGA
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| Protein sequence | MSQSSKRKND SVVETFKDII PLTFGEEIGN AASHGAAALL TLFILPYAAV HSFNNGGTLE
SISVSVYVIS IFMMFISSTI YHSMQNNTSH KYILRIIDHS MIYVAISGTY TPVLLSVVGG
WLGWLVTILL WGTTLWGILY KSIATKVNHR LSLIVYLVMG WVGIIFLPII IMRTSWWFIF
FIFLGGLSYT IGAWFYAQKN KPYFHMIWHI FIVLASFLHM IGIFYFM
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