Gene SERP0781 details

Gene Information

• Locus tag: SERP0781
• Symbol: def-2
• ID: 3241004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 780762
• End bp: 781250
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637167441
• Product: peptide deformylase
• Protein accession: YP_188364
• Protein GI: 57866753
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.64209
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGTAA AGAAATTAGT AAAATCAACA CATCCTATTT TGAATAAAAC GATTCAACCT 
GTAAGCACGT ATGATCAAAA ACTAAAAGTG TTATTGGAAG ATTTGGAAGA TACATTATAT 
CATGAGGAAG CCGCTGCAAT TAGTGCACCT CAAATTGGAG TAGATCAAAG TGTTGCACTC 
ATCGATATGG AACAAGAAGG GTTATTACAA CTTATTAATC CTGTCGTTAA AAGTCAATCT 
CAAGAGACTG TTTCTGACTT AGAAGGCTCA ATCAGTTTAC CTCATATATA TGGAGAAGTT 
AAACGTAGCA AAATGATCAC TGTACAAAGC TATGATATCA ATGGAAATGC AGTTGAATTA 
ACTGCATATG ATGATATCGC ACGCATGATT TTACATATGA TTGATCATCT TAATGGAATT 
CAATTTACCA AAAGAGCACA TCATATATTA AATGAAACTG AAGTGGAGGC GTATTTTGAC 
AATGAGTAA 

 

Protein sequence

MTVKKLVKST HPILNKTIQP VSTYDQKLKV LLEDLEDTLY HEEAAAISAP QIGVDQSVAL 
IDMEQEGLLQ LINPVVKSQS QETVSDLEGS ISLPHIYGEV KRSKMITVQS YDINGNAVEL 
TAYDDIARMI LHMIDHLNGI QFTKRAHHIL NETEVEAYFD NE