Gene SAG1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1361 
Symbol 
ID1014170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1371322 
End bp1372566 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content35% 
IMG OID637316537 
Producthypothetical protein 
Protein accessionNP_688359 
Protein GI22537508 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00937892 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC GACAAAATTT AGGAATTAGT AAAAAAGGAG CAATTATATC AGGGCTCTCA 
GTGGCACTAA TTGTAGTAAT AGGTGGCTTT TTATGGGTAC AATCTCAACC TAATAAGAGT
GCAGTAAAAA CTAACTACAA AGTTTTTAAT GTTAGAGAAG GAAGTGTTTC GTCCTCAACT
CTTTTGACAG GAAAAGCTAA GGCTAATCAA GAACAGTATG TGTATTTTGA TGCTAATAAA
GGTAATCGAG CAACTGTCAC AGTTAAAGTG GGTGATAAAA TCACAGCTGG TCAGCAGTTA
GTTCAATATG ATACAACAAC TGCACAAGCA GCCTACGACA CTGCTAATCG TCAATTAAAT
AAAGTAGCGC GTCAGATTAA TAATCTAAAG ACAACAGGAA GTCTTCCAGC TATGGAATCA
AGTGATCAAT CTTCTTCATC ATCACAAGGA CAAGGGACTC AATCGACTAG TGGTGCGACG
AATCGTCTAC AGCAAAATTA TCAAAGTCAA GCTAATGCTT CATACAACCA ACAACTTCAA
GATTTGAATG ATGCTTATGC AGATGCACAG GCAGAAGTAA ATAAAGCACA AAAAGCATTG
AATGATACTG TTATTACAAG TGACGTATCA GGGACAGTTG TTGAAGTTAA TAGTGATATT
GATCCAGCTT CAAAAACTAG TCAAGTACTT GTCCATGTAG CAACTGAAGG TAAACTCCAA
GTACAAGGAA CGATGAGTGA GTATGATTTG GCTAATGTTA AAAAAGACCA GGCTGTTAAA
ATAAAATCTA AGGTCTATCC TGACAAGGAA TGGGAAGGTA AAATTTCATA TATCTCAAAT
TATCCAGAAG CAGAAGCAAA CAACAATGAC TCTAATAACG GCTCTAGTGC TGTAAATTAT
AAATATAAAG TAGATATTAC TAGCCCTCTC GATGCATTAA AACAAGGTTT TACCGTATCA
GTTGAAGTAG TTAATGGAGA TAAGCACCTT ATTGTCCCTA CAAGTTCTGT GATAAACAAA
GATAATAAAC ACTTTGTTTG GGTATACAAT GATTCTAATC GTAAAATTTC CAAAGTTGAA
GTCAAAATTG GTAAAGCTGA TGCTAAGACA CAAGAAATTT TATCAGGTTT GAAAGCAGGA
CAAATCGTGG TTACTAATCC AAGTAAAACC TTCAAGGATG GGCAAAAAAT TGATAATATT
GAATCAATCG ATCTTAACTC TAATAAGAAA TCAGAGGTGA AATAA
 
Protein sequence
MSKRQNLGIS KKGAIISGLS VALIVVIGGF LWVQSQPNKS AVKTNYKVFN VREGSVSSST 
LLTGKAKANQ EQYVYFDANK GNRATVTVKV GDKITAGQQL VQYDTTTAQA AYDTANRQLN
KVARQINNLK TTGSLPAMES SDQSSSSSQG QGTQSTSGAT NRLQQNYQSQ ANASYNQQLQ
DLNDAYADAQ AEVNKAQKAL NDTVITSDVS GTVVEVNSDI DPASKTSQVL VHVATEGKLQ
VQGTMSEYDL ANVKKDQAVK IKSKVYPDKE WEGKISYISN YPEAEANNND SNNGSSAVNY
KYKVDITSPL DALKQGFTVS VEVVNGDKHL IVPTSSVINK DNKHFVWVYN DSNRKISKVE
VKIGKADAKT QEILSGLKAG QIVVTNPSKT FKDGQKIDNI ESIDLNSNKK SEVK