| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2022 |
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| Symbol | |
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| ID | 4115912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2048313 |
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| End bp | 2048813 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036810 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_644781 |
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| Protein GI | 108804844 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCTCCG AGCCCCCGGC GGCCATCCAG CGGGCCATGT ACCCGCTGCG CTACGAGGAG
GCCATACGGG AGGCCTCCCG CGAGCACGGG CTGGAGCCCG CCTTCGTCGC CGCCGTGATC
TACGCCGAGA GCCGCTTCCG GCAGGAGGCC GTCTCGCACA AGGGGGCGCA CGGCCTCATG
CAGATCACCC CGCCCACCGC CAGCTTTATC CGGCGGCACA GCGGCATCGC CGGGGACTAC
CGGCGGGACC CCCTTGTGAA CCTGCGGATG GGCGTGTGGT ACCTCGCCTA CCTGGAGGAC
CGCTACCTGG GCGATGAGAG GCTCATGCTC GCGGCGTATA ATTCCGGGGT GGGCAGCGTG
GACGGCTGGC TCTCGGACGA GGACTTCGAC ATCCGGCGCG ACATCCCCTT CGAGGAGACC
AGGGAGTACG TGAGCACCGT CCTCGAGGCC CGGTCCAAGT ACGAGGAGCT CTACGGGAGG
GATCTGGATC GAGACACATA G
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| Protein sequence | MLSEPPAAIQ RAMYPLRYEE AIREASREHG LEPAFVAAVI YAESRFRQEA VSHKGAHGLM
QITPPTASFI RRHSGIAGDY RRDPLVNLRM GVWYLAYLED RYLGDERLML AAYNSGVGSV
DGWLSDEDFD IRRDIPFEET REYVSTVLEA RSKYEELYGR DLDRDT
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