| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1651 |
|---|
| Symbol | |
|---|
| ID | 4116260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1673732 |
|---|
| End bp | 1674574 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638036450 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_644424 |
|---|
| Protein GI | 108804487 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.790861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGAGG CGGTGCGTGC GGCTACCCGC ACCCTGAGGG AGGCGGGGGT CCCGGAGCCG
GAGGCCTCCG CGCAGGTGCT CATGTCCGAG CTCCTCGGGG TGCGCAGGGG CGAGGTTCTC
CTCCGCGAGG AACCGCTCTC CCCCGAGGAC GCCGCGCGGT ACGAGCGGTG GATCTCCCGC
CGCCTCAAGC GCGAGCCCGT GCAGCGCATC CTGGGCTACG CCTACTTCAG GAACCTCAAG
CTCTACCTGA ACGAGGACAC CCTTATCCCG CGCCCCGACA CCGAGAGCGT GGTGGAGGCG
GCGCTGGAGC GGATCGACGC CCGCCCCTTG CGGGTGTTGG ACATCGGGAC CGGCTCCGGC
GCGATCGCCA TAGCCATCGC CCAGGAGCGT CCCGGCTGCG AGGTGCACGC CACGGATATC
TCGCGGAGGG CGCTGGAGAT CGCCCGCCGC AACGCGGATC TGAACGGGGC GCGGGTCCGC
TTCCACCTCG CGGACCTCGT GAGCGGGCTG CGCCTGCCCG GCGGGGTGGA CCTCCTCGTC
TCGAACCCTC CCTACGTGGA CGTGCGCGGC GCCCAGCGGC GGCTCGCCCC CGAGGTCCGG
GAGTGGGACC CCCCCATCGC GCTCTACAGC GGCGAGGACG AGTACGCTTT CTTCCGCAGG
ATCTTTGAGG AGACCCCAGA GGTGCTGAAG GAGGAGGCCG ACGTGGTGCT CGAGGTCGGC
GACGGGCAGT CGCAGAAGGT GCTCGAGATG GGAGAGGAGC GGGGCTTCAG GCCGCTCGGC
ACCCGCAGGG ATCTCGCGGG GGACGTCCGG GCGGTGCTCC TGAGGTGGGA GGGAGGAAGA
TGA
|
|---|
| Protein sequence | MREAVRAATR TLREAGVPEP EASAQVLMSE LLGVRRGEVL LREEPLSPED AARYERWISR
RLKREPVQRI LGYAYFRNLK LYLNEDTLIP RPDTESVVEA ALERIDARPL RVLDIGTGSG
AIAIAIAQER PGCEVHATDI SRRALEIARR NADLNGARVR FHLADLVSGL RLPGGVDLLV
SNPPYVDVRG AQRRLAPEVR EWDPPIALYS GEDEYAFFRR IFEETPEVLK EEADVVLEVG
DGQSQKVLEM GEERGFRPLG TRRDLAGDVR AVLLRWEGGR
|
|---|
| |