| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1558 |
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| Symbol | |
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| ID | 4116888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1577597 |
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| End bp | 1578781 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638036354 |
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| Product | sarcosine oxidase |
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| Protein accession | YP_644332 |
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| Protein GI | 108804395 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01377] sarcosine oxidase, monomeric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.467304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTC CCGAAGTGGT CGTTGTTGGC TGTGGCGGGC TCGGTTCTGC CGCCCTCTAC
TGGCTGTCTC GCAGAGTGGG ATCTTCCGCG CTCGGAATCG AGCAGTTCCG CATCGGCCAC
GAACGGGGAG CCTCCCAGGA CCACTCCAGG ATCATCAGAC TGGCCCAGCA CCAGTCCGAG
TACGCAGCCC TCGCCCCGCA GGCCTATGAA ACCTGGCACG AGCTGGAGGA GCAATCAGGA
CAACGGCTGG TGATCAAGAC CGGCGGTCTG GTGATAGAAG CCTCGGAGGA GCGTGACCCG
GCCAAGGTCG GCACCCGCAA CGTAGACGGG TACGTAGCCA CCTTCGAAGA GCACGGCTTC
GACTACGAGC TGTTGGAGCC GGAGGAGTTG ATAAGCCGCT GGCCGCAGTT CCGGCTGAAG
GGGAACGAGC GCATCGTCTA CCAGAAGGAC TCTGGAATCG TGGACGCCAG AAAGGCCAAC
GCGACCCACG TCGCGCTCGC GCGCGCGCAG GGTGCCCGAA TCCTGGAGGA GACACCGGTT
CGGAGCGTAC GCCCCAGCGG AGCAGGAGTC GAGGTGGTCA CAGACCACGA GACCTTCTTC
GCGGACCGCG TGGTGATTAC GGCTGATGCA TGGACGAACA ACGTTCTGGA GGGGGTCGGT
TTGCGGCTTC CGCTGACCGT TACTCAGGAG CAGGTGACCT ACTACGCGAC ACCAAACCTG
AAGGACTTCT CTCCCGAGCG ATTCCCAGTC TTCATGTGGC ACGGGAAGCA CAATTTCTAC
GGCTTTCCCG TCTACGGGGA GGTGGCTACC AAGCTGGGAC AGCACATGGG TGGCCACGAG
GTTACGGCCG AGACCAGAAC CTTTGAGCCG GATCCGGTTC GACAGGAGCG CTACCGGAAC
TTCCTGAGCA AGCACATACC CGGTTTCCTG GGCCCCGAGC TGTACACCAA AACCTGCCTG
TACACGATCC CACCGGACCA GAACTTCATC ATCGACACGC TGCCGGAACA TCCCCAGATC
TCGGTGGCGA TTGGGGCGGG ACATGCCTTC AAGTTTGCCA GCCTGATCGG TCGGATACTC
TCGGAGTTGG CCTTGGACGG GAGCTCCTCC TTCCCGATCG AACCGTTCAC TATCACCCGA
CCCGCCATTA CCGATAAGAC CTTTCAGAGG TCGTTTCATG CTTGA
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| Protein sequence | MKSPEVVVVG CGGLGSAALY WLSRRVGSSA LGIEQFRIGH ERGASQDHSR IIRLAQHQSE
YAALAPQAYE TWHELEEQSG QRLVIKTGGL VIEASEERDP AKVGTRNVDG YVATFEEHGF
DYELLEPEEL ISRWPQFRLK GNERIVYQKD SGIVDARKAN ATHVALARAQ GARILEETPV
RSVRPSGAGV EVVTDHETFF ADRVVITADA WTNNVLEGVG LRLPLTVTQE QVTYYATPNL
KDFSPERFPV FMWHGKHNFY GFPVYGEVAT KLGQHMGGHE VTAETRTFEP DPVRQERYRN
FLSKHIPGFL GPELYTKTCL YTIPPDQNFI IDTLPEHPQI SVAIGAGHAF KFASLIGRIL
SELALDGSSS FPIEPFTITR PAITDKTFQR SFHA
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