| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1465 |
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| Symbol | |
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| ID | 4116131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1484443 |
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| End bp | 1485582 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638036257 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_644239 |
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| Protein GI | 108804302 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01174] cell division protein FtsA
[TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00540652 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGGCC GGGTAGCCGC GCTCGGGCGT CTGCTGCCGC AGCCCATCGG GATGGACATC
GACCGGAGCG CCATAAAGGC GGTCCAGCTC TCCGGCTCCC CCGGGGGCTA CGTTCTGGAG
CACGTCGGCT ACCGCAGGCT CCCGGAGGGC GTGATCTCCG GGGGCGAGGT GTCGGACCCG
GAGCTTCTGG CCGCCGAGTT GAGGAGCTTC CGGGAGACCC ACGCCTTCCG GGGCAGATCC
GTGCTCCTCG GGGTCGCGAA CGAGCAGGTG GTGGTGCGCT TTGTCAGCTT TCCGCGCATG
GAGCCCGGCG AGCTCGCCGG GGCCCTCGCC TTCCAGGCCC AGGACTACAT CCCGGTGCCG
CTCGAGGAGG CGGTCCTGGA CCACGCTGTG CTCGGCCCCT CCCCCGAGAA CCCCGGGGAG
GACAGGGTGC TGCTCGTCGC CGCCCGCAAG GAGATGGTCC GCCGGCTCAC CGCGGCGGTC
CGTTCCGGGG GGTTCCGGCC GGTCGGGGTG GACGTGAAGG CGCTTTGCCT GCTGCGCTCG
GCCCTCCCCG CGACCTTCTT CGAGGACGAG GGCGACGTGG TGCTGCTGGA CGTCGGGGGC
GAACTCTCCA ACCTGCTCGT CGCCGGCGGC GGGCGTCCCG CGCTGGTCCG CTTTCTCCCG
CTCGGGGTCC GGGACTTCGT GCGGCGGGTC TCCGAGGTCG CGGACCTCCC GGAGGACCAG
GCGGAGAGGC TCGTCTTCGA GCCCGGCGTG GGCCTCGGCG GCGTCCCCGA GGCCCCCTCC
CTCCCCGCCC CGGAGCAGCA GGAGACCGAG GAGCTTCCCG ACCCGGCCCT CGTCTACGAC
GTGCGGCGGG GGCTGGAGGA GGCCGTCCGC CTGCTCGCCG AGGAGGTCCA GCGCTCCGCC
GAGTACCACC AGGCGCAGCC CGGGTCCCGG GAGGTCTCGC TCGTGATTCT CTCCGGGGAG
GCCGGGCTCA TCCCCGGCCT CGCCTCCCAC CTCTCCGAGC TGCTGGGGCT GCCGGTGGAG
CCGGCGCGCC CCCTCGCCGG GGTCCTGAGG AACCGCTCCA ACGTCTCCGA CGAGCAGCTG
CGGGCCATGG AGCCGGTGCT CGCCGTGGCG CTCGGGCTCG CCATGGAGGA GGGCCCGTGA
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| Protein sequence | MLGRVAALGR LLPQPIGMDI DRSAIKAVQL SGSPGGYVLE HVGYRRLPEG VISGGEVSDP
ELLAAELRSF RETHAFRGRS VLLGVANEQV VVRFVSFPRM EPGELAGALA FQAQDYIPVP
LEEAVLDHAV LGPSPENPGE DRVLLVAARK EMVRRLTAAV RSGGFRPVGV DVKALCLLRS
ALPATFFEDE GDVVLLDVGG ELSNLLVAGG GRPALVRFLP LGVRDFVRRV SEVADLPEDQ
AERLVFEPGV GLGGVPEAPS LPAPEQQETE ELPDPALVYD VRRGLEEAVR LLAEEVQRSA
EYHQAQPGSR EVSLVILSGE AGLIPGLASH LSELLGLPVE PARPLAGVLR NRSNVSDEQL
RAMEPVLAVA LGLAMEEGP
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