Gene Rxyl_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0939 
Symbol 
ID4116781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp976858 
End bp977520 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content77% 
IMG OID638035724 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_643718 
Protein GI108803781 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.152526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG GCGAGGCGCA CGACCGCGCC CGGGAGAGGC TCGGCCCCTA CCTGCTCGGC 
CAGCTCGAGC CCGGGGAGCG CGCAGAGGTC GAGGAGCACC TCCGCGAGTG CCCGGCCTGC 
CGGGAGGAGC TGCGGGAGCT GGGGGTCGCC CACGCTGCCC TGCGCGCGGC CGCCGCGCTC 
CGCCCGCCCG AGACCGTCCG CGAGCGGCTC CCGCGCGGAA GAAGCGCCCT CTTCGGCAGG 
CCCGCCCTGG CGGCCGCGCT CCTGGCCGTG CTCGTCGTCG CCGGGGCCCT CTACGCCGCC 
CTCCACCGGC CGGACACCGC CGAGGCGATG ACCGCCACCC TCTCCCCCAC CGGCCTCGCC 
CCGGAGGCCC GCGGCGAGCT CAGGATGGAG GAGGCCGGGG GCAACATGCG CGTGCGGCTG 
GAGGTCTCGG GGCTCCCGCC GCTCGGACGC GGCGAGTACT ACGAGCTCTG GTTCGTCCGG 
GACGGGCACA GGATAAGCTG CGGCGGGTTC ACCGTGGACG AGGCGGGGCG GGCGAGCGTG 
GTGATGAACG CCCCGAAGGT CGCCTACGGC TACCGGAGGG TGGGCGTGAC GCGCGAGCAC 
TCCCCCGGGG ACCCGGGGCC GAGCCCGGAG CGGGTGCTGC ACGGCCGGCT GCAGGAGAGC 
TAG
 
Protein sequence
MTGGEAHDRA RERLGPYLLG QLEPGERAEV EEHLRECPAC REELRELGVA HAALRAAAAL 
RPPETVRERL PRGRSALFGR PALAAALLAV LVVAGALYAA LHRPDTAEAM TATLSPTGLA 
PEARGELRME EAGGNMRVRL EVSGLPPLGR GEYYELWFVR DGHRISCGGF TVDEAGRASV 
VMNAPKVAYG YRRVGVTREH SPGDPGPSPE RVLHGRLQES