Gene Rxyl_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0148 
Symbol 
ID4117795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp154381 
End bp154773 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content74% 
IMG OID638034940 
Productcupin 2, barrel 
Protein accessionYP_642939 
Protein GI108803002 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGCA TCTCGCCCAA GGACACGAAG ACCGAGCGCG GCCCCGGCGA GTGGTTCACC 
GGGGAGGTGT GGATGGACCC CTCGCCGCCC CGCACCCCGG AGGCCGGCGT CTTCCGGGTG
CTCTTCGCCC CTGGGGCCCG CACCAACTGG CACACCCACC CGGAGGGGCA GGTGCTCTAC
GTGGTCAGCG GCCGGGGGCT GGCCCAGGCC GAGGGCGGCC CCGTGGTGGA GATGGGCCCC
GGCGACGTCG TCACCTTCGC CCCGGGCGAG AAGCACTGGC ACGGCGCCGC CCCCGACTCC
TGCATGCTGC ACGTGGCCAT AAACCCGGCC GCGAGCACCG ACGGCGGCAC CGAGTGGCTG
GAGCCGGTCG GCGACGAGGA GTACCCCGGC TGA
 
Protein sequence
MRRISPKDTK TERGPGEWFT GEVWMDPSPP RTPEAGVFRV LFAPGARTNW HTHPEGQVLY 
VVSGRGLAQA EGGPVVEMGP GDVVTFAPGE KHWHGAAPDS CMLHVAINPA ASTDGGTEWL
EPVGDEEYPG