Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3696 |
Symbol | |
ID | 4898348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 807172 |
End bp | 808425 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640114304 |
Product | O-antigen polymerase |
Protein accession | YP_001045558 |
Protein GI | 126464445 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0487808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.621123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG ACGCTCTGGG CAAACCGCTC GGGTTGCAGG TCGAGTGGCG CACGCTCGAG ATCGTGGCGG TCCTTCTCGC GCTGATGATC CAGACCGGCG CGGTGTCGGT CCTTCTGCTC GAGTCGGACG GCGGCCTCGG ATCGGGCCCC CGGATGATCC TGCGGGCCAT GGCGCTGCCG GGCTATGCGG TCACCCTCGT CATCCTCGCG CGCTACTATG TCCCGTTCCT CGCGCTCCTC CGGCAGAACC TGCCGATGGC CCTGTTTCTG GTCCTGCCGT TCCTCTCGGC CTTCTGGTCG ATCGGGCCCT CGGTCACCCT GCGCCGGGCG ATCGCCATCT TCTTCTCGAT CCTGATGTGC TATGTCCTCG CCATCCGCTT CACGCCGCGG CAGTTCCTCG TGCTCTCGAC GCTGGTGATC GCGGCGACGC TGATCCTCAG CCTCCTTGCC ATCGTGGCGC TGCCGGGCCT CGCCTTCATG CCGCAGGGCC CCGAACTGCG CGGGGTCTTC GTCCACAAGA ACGTGCTGGG CTGGTATGCG GCCTTCGGGC TGCTGCTGTC GGCCGCGCTC GGCGCCGACC GCACGCTCGG GCTGCGGCCC TTCGCGATCT CGGTCTTCGT CGCGGCGCTG GTCTGCCTGC TGCTCTCGCA GTCGGGCACG GCGCTCATCA CCGCGGCGCT GGCGGTGGCC TTCACGGTCT TCTACGCGCT GCTGCGCCGG GCGCGCCCGC TCGGGCGCAG CTTTCTCACC CTGCTCGTGC TGCAGTCGAC GGTGCTGTTT GCGGCCAGCG TGAACTCGTT CGTGCCCGCG CTGCTGGAGG GGATGGGCAA GGACGCCACC CTGACCGGGC GCGTGCCGCT CTGGGATCTG GTGGATCAGG CGATCCTGCG CCGGCCCGTG CTGGGCTACG GCTATCAGGC CTTCTGGAGC GAGGGCAGCG GCGAAGCCTG GGTGATCTGG ACCAAGCTCG TCTGGATGGC GCCGCACGCC CACAACGGCT ACCGCGACAC GCTGCTGAGC CTCGGGCTCG TGGGGCTCGC GCTCCTCCTG GTCGTGATCG TGCGCGCCCT CCGGCAGGGC GCGGCCCTTC TGTCGCGCGA GCCGTCCGAG CCCTGGCTCG TGCTCAATGT CCTCGTGGCC GTCTTCCTCG TGATGAACAT GACGGAGAGC CTGCTTCTGC AGCAGAACAA CTTCCTCTTC ATCCTGTTCG TCACGGCGGC CCTCATGTTC TCTAGACGGG AGACGCCGAC ATGA
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Protein sequence | MTGDALGKPL GLQVEWRTLE IVAVLLALMI QTGAVSVLLL ESDGGLGSGP RMILRAMALP GYAVTLVILA RYYVPFLALL RQNLPMALFL VLPFLSAFWS IGPSVTLRRA IAIFFSILMC YVLAIRFTPR QFLVLSTLVI AATLILSLLA IVALPGLAFM PQGPELRGVF VHKNVLGWYA AFGLLLSAAL GADRTLGLRP FAISVFVAAL VCLLLSQSGT ALITAALAVA FTVFYALLRR ARPLGRSFLT LLVLQSTVLF AASVNSFVPA LLEGMGKDAT LTGRVPLWDL VDQAILRRPV LGYGYQAFWS EGSGEAWVIW TKLVWMAPHA HNGYRDTLLS LGLVGLALLL VVIVRALRQG AALLSREPSE PWLVLNVLVA VFLVMNMTES LLLQQNNFLF ILFVTAALMF SRRETPT
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