| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3554 |
|---|
| Symbol | |
|---|
| ID | 4898429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 642852 |
|---|
| End bp | 643562 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640114163 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001045417 |
|---|
| Protein GI | 126464304 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.433786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC TGCAACTCGA GAAGCTCGGC GTGCGCTTCG GCGGCCTCGT GGCGGTGCAG
GACGTGTCGC TCGCGGTCGA GGAAGGCCAG ATCTACGGCC TCCTCGGGCC GAACGGGGCG
GGCAAGACCA CGCTCGTCAA CATGATCTCG GGGCTGATCC GGCCCACCTC GGGCAGCCTG
CGCTTCGCGG GCGAGGCCGG CGGGCCCTGG CCCATCGCGG ATGCGGTCTC GCGCGGGATC
GTGCGCACCT TCCAGCAGAC CCGCGCCTTC CTCGGCCTCA GCGTGCGCGA GAACCTCCGG
ATCGCGGCCG CCGCCTCGGG ACGGGACGCG GACGCGGCCG AGCTGATCGA GGCCTTCGGC
CTCGGCCCCG TCCTCGACCG GCCGGCGGGC GATCTGCCCT ATGCCACGCT CCGCCATCTC
GGCATTGCCT TGGCCCTCAC GCTGAAGCCG CGGCTTCTCC TGCTCGACGA GCCCGCGGTG
GGCCTCACGG GCGGCGAGGT CGACCGGCTG GCCCGGCTGA TCCGGGACTG GAATGCCCGC
GGCGTCACGG TGCTGCTGAT CGAGCACAAT GTGCGCTTCC TCATGTCGCT GGCCGACAGG
GTGGCGGTGC TCGACCGCGG GCGGCTCCTG TTCGAGGGCA CGGCCGCCGA CTGCCAGCGC
AACCCCGAGG TCATCGATGT CTATCTTGGC CGGAGGAAAG AGGATGCTTG A
|
|---|
| Protein sequence | MSLLQLEKLG VRFGGLVAVQ DVSLAVEEGQ IYGLLGPNGA GKTTLVNMIS GLIRPTSGSL
RFAGEAGGPW PIADAVSRGI VRTFQQTRAF LGLSVRENLR IAAAASGRDA DAAELIEAFG
LGPVLDRPAG DLPYATLRHL GIALALTLKP RLLLLDEPAV GLTGGEVDRL ARLIRDWNAR
GVTVLLIEHN VRFLMSLADR VAVLDRGRLL FEGTAADCQR NPEVIDVYLG RRKEDA
|
|---|
| |