| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2850 |
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| Symbol | |
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| ID | 4897487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 3008402 |
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| End bp | 3010369 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640113453 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001044724 |
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| Protein GI | 126463610 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTTAGAA GACAGGTCGG ACACGGGGCG CGACAAACGG TCGAAATAAC AACCGGGGCG
GCAAAAGGGC AGGAATTCCA GGTGAAGAAA CTCCTTTTCG GTCTCGTTGA CCGGCTGACC
AGAGCGCAGA AGCGTGGGCT TCTTCTTCTG GCGGATGTGC TCGTGGCGCC CCTTGCGCTG
CTGATCACCG GCATCTTCAT CCGCGCCCCC GGAGGCGAGC ACGAGTGGCT TCTCTTCCCC
GGCGCGGCGC TCTTTGCCTT CGGTCTCTCG CTGCTTTTCG GGATGCCCCG GATCAAGCTC
AACGCCTATG AGACCATGGC CATCCTGAAG ACCGGCGCCT TCGCTGCGGT GCTGACCCTC
GTGCTCTCGA TGCTCGCGTC GGTGGTGGGC ACCGCGGTGC CCGCGGCGGC GGCGATCCTC
TTCGGCCTTC TGTTCTTCAT CCTGTCGGTC GGCGCCCGGA TGGTCATGCT GCATGCGCTG
CTCTGGGTGC TGCAGATCGG CCAGAAGGGG TGCCGCGTGC TGATCTACGG CGCGGGCAAC
ACCGGCACGC AGCTCGCGGC GGCGCTCCGC TCGCGCGGAA CGATCCGGCC CATCGCCTTC
GTCGACGACA ATCCCGCGCT GCAGGCGATG GTGATCGCGG GGCTCCGCGT CTATCCGTCG
GACCGGATCG AGCGGCTGGT GCGGGAGCGC GACGTGTCCC GTGTGCTTCT TGCCATGCCC
TCGGAATCGC CCGCCAAACT TGCCCGGATC GCCCACCGGC TGCAGCTCGC GGGTGTCGAT
GTTCACACCG TGCCCTCCTT CGCGCAGCTC GTGGGCGAGG AGCAGCTGGT CGACAACCTG
TCTCCCTTCA CCTTCGGCCG TTTCCTCGGC CGCCAGCAGA TCGAGGATGC GCTGCCACAG
GGGGCCGATG CCTATGTCGG CCGCACGGTG CTGGTCTCGG GCGCGGGCGG CTCGGTCGGA
TCCGAGCTCT GCCGCCAGCT GCTGCTGATC CGTCCCCGGC GCATCGTCCT GTTCGAGATC
AGCGAGATCG CCCTCTACAC CATCGACCGC GAGCTGCAGG CGATGGCCGA AGGCACCGGG
GTCGAGATCG TGCCGGTCCT CGGATCGGTC ACCGATTCGC GGCTGTCGCG GATGGTGATG
CAGGATCACG GGGTCGAGGT GGTGTTCCAT GCAGCCGCCT ACAAGCATGT GCCGCTGGTC
GAGCACAATC CGATCGCGGG TCTGGCCAAC AATGTGCTGG GCACCCGGAC GCTGGCGGAT
GCCGCGCACG AGGCCGGCGT GGCGCGCTTC ATCCTGATCT CGACAGACAA GGCGGTGCGC
CCGACGAATG TCATGGGCGC CTCGAAGCGG CTGGCCGAGC TGGTGATTCA GGATCTCGCG
AAGCGGTCGA AGAAAACGAT CTTTTCGATG GTGCGGTTCG GCAACGTTCT CGGCTCGTCG
GGCTCGGTCA TCCCGCTCTT CAAGGAGCAG ATCGCCCGCG GCGGACCGGT CACGCTGACG
CACGAGGATG TCACCCGTTT CTTCATGACC ATCTCGGAAG CGGCACGGCT GGTGCTGCTG
GCGGGCTCCT TCGCCGATCC GGGCGATTGC CGTGGCGGCG ATGTGTTCGT GCTCGACATG
GGCAAGCCCG TGCGCATCCG CGATCTCGCC GTGCAGATGA TCGAGGCGGC CGGCAAGTCG
GTGCGCGATG AGCGCAACCC CTTCGGGGAC ATCGAGATTG TGGTCACGGG TCTGCGGCCC
GGCGAGAAGC TGCACGAGGA GCTGCTGATC GGCGAGGGGC TGCTGACCAC GCCGCACTCG
AAGATCCTGC GCGCTCAGGA GGAGAGCCTG TCCGAGCTCG AGATGGCCAC CGCGCTGCGG
GCGCTGCGCA GTGCCATGGC GGCCGGAGAC CCGCAGGCGG CCCGCCGGGT CATACTCTCC
TGGGTTGAGG GATATCGCCC TCCGGAAATC GTTGCCGCCG GGCGATAG
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| Protein sequence | MVRRQVGHGA RQTVEITTGA AKGQEFQVKK LLFGLVDRLT RAQKRGLLLL ADVLVAPLAL
LITGIFIRAP GGEHEWLLFP GAALFAFGLS LLFGMPRIKL NAYETMAILK TGAFAAVLTL
VLSMLASVVG TAVPAAAAIL FGLLFFILSV GARMVMLHAL LWVLQIGQKG CRVLIYGAGN
TGTQLAAALR SRGTIRPIAF VDDNPALQAM VIAGLRVYPS DRIERLVRER DVSRVLLAMP
SESPAKLARI AHRLQLAGVD VHTVPSFAQL VGEEQLVDNL SPFTFGRFLG RQQIEDALPQ
GADAYVGRTV LVSGAGGSVG SELCRQLLLI RPRRIVLFEI SEIALYTIDR ELQAMAEGTG
VEIVPVLGSV TDSRLSRMVM QDHGVEVVFH AAAYKHVPLV EHNPIAGLAN NVLGTRTLAD
AAHEAGVARF ILISTDKAVR PTNVMGASKR LAELVIQDLA KRSKKTIFSM VRFGNVLGSS
GSVIPLFKEQ IARGGPVTLT HEDVTRFFMT ISEAARLVLL AGSFADPGDC RGGDVFVLDM
GKPVRIRDLA VQMIEAAGKS VRDERNPFGD IEIVVTGLRP GEKLHEELLI GEGLLTTPHS
KILRAQEESL SELEMATALR ALRSAMAAGD PQAARRVILS WVEGYRPPEI VAAGR
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