Gene Rsph17029_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2719 
Symbol 
ID4896996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2864140 
End bp2864856 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID640113321 
Productputative transmemebrane protein 
Protein accessionYP_001044593 
Protein GI126463479 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.934003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0999716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGACGC GCCGATCCGC CGACCTTCTC CGCCGCCTGC CGATCCTCGT GATTCTCCTC 
GTGGCCGCGG GAGGGGCGGT GCTGCTGCAC GACCGGCTGT CCTTCGAGGC GCTGGCGCAG
CACCGCGAGG CGCTTCTGGC CTTCCGCGAT GCCCATTACT GGGCCTCCGT GCTGGTCTTT
CTGGCCACCT ATGTGGCGGT GGTGACCTTC AGCCTGCCGG GCTCGCTGCT CTGCACCCTG
ACGGGGGGCT TCCTCTTCGG GCTCTTTCCG GGCGTGTTCT ACAATGTCGC GGCCGCGTCG
GTGGGGGCGG TGCTCCTGTT CCTCGCGGCG CGGGCGGGCT TCGGCGCCCG GCTCTCGCAG
CGGATCGAGG CGCAGGGCGG TGCGGTCGCG CGCCTTCAGG CCGGGATCCG CGAGAGCGAA
TGGTCGGTGC TGTTTCTCAT GCGGCTGGTG CCCGTCGTGC CCTTCTTCGT GGCGAACCTC
CTGCCGGCCC TCCTGAACGT GCCGCTCCAC CGGTTCGCCG TGACCACGGT GCTGGGCATC
CTGCCCGGCG CGCTCGTCTA TACCTCGGTC GGCACCGGCC TCGGCGCCGT GCTCGCGCGC
GGAGAAGCGC CGGATCTGGG CATCATCTTC ACGCCGCAGG TGCTCGGGCC GCTTCTCGGC
CTTGCCGCGC TCTCGGCGCT GCCTATCGTC CTGAAACTCG CACAGAAGGG ACGGTGA
 
Protein sequence
MQTRRSADLL RRLPILVILL VAAGGAVLLH DRLSFEALAQ HREALLAFRD AHYWASVLVF 
LATYVAVVTF SLPGSLLCTL TGGFLFGLFP GVFYNVAAAS VGAVLLFLAA RAGFGARLSQ
RIEAQGGAVA RLQAGIRESE WSVLFLMRLV PVVPFFVANL LPALLNVPLH RFAVTTVLGI
LPGALVYTSV GTGLGAVLAR GEAPDLGIIF TPQVLGPLLG LAALSALPIV LKLAQKGR