Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3479 |
Symbol | |
ID | 5085895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 357085 |
End bp | 360924 |
Gene Length | 3840 bp |
Protein Length | 1279 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640485043 |
Product | hypothetical protein |
Protein accession | YP_001169659 |
Protein GI | 146279501 |
COG category | [M] Cell wall/membrane/envelope biogenesis [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.165023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACC TCGCCCGGCT GCACCTGATC GGTGTCGGGG GAAGCGGCAT GCTGCCTCTG GCGCTCCTGC TGAAGCAGGC GGGCCACCCC GTCACCGGCA GCGACAATCT CTGCGCCCCC GCGCGTCTTG CCCTTCTGGA AGCGCAGGGG ATCGCGGTCC TTTCGGGGGC CGATCCGACC CTTGCGCGGG CCGCGGATTG TGTGGTGGCA AGCCCGGCCA TTCCCGAGAC CCATGTGGAA CGGCGAGCGG CGCGGCGCGC TGGCATTCCC GTCAAGACCC GCGCCCGGAT GCTGGCCGAG CTGATCGCCG ACCGTCTCAC GATCTGCGTG GCGGGCAGCC ATGGCAAATC GACGGTGACG GCGATGCTCA TCCACATCCT GAGCGCCGCG GGAAAGGACG ATTTCGGCTA CATGTTGGGG GCATCCTTTG CAGATCCGGG CATTGTCCCC GCGCGACTGG GCGCGCCCGA CGCGCCCTTC GTGACGGAAG CCTGCGAAGC TCATGGCGCT CTGGCGCATT GGCTGCCCTC GCATGCCATC CTCACCAATC TCGATGATGA TCACGCGGAT CACTATGGCG GGCCGAGCGG GTTGAGGCGC GCCTTTTCAG CCTTCCTGTC GCGACTGCCG CCGGAGGGTC GGGCGGTGGC CTGCGGGGAC GACCTGGATG TCGTCGATAT CCTGCGCGAG GCGCGCTGTG CGGCCCTCAC CTATGGCTTT CGCGATGAGA ATGCCTTGCG GGCGGTTCAG GCCGGGGATG GAAGCGCCAC CGTCTTCCTG CACGGAACTG AACTGGGGGC GCTGTCTCTG GCCGTTCCGG GGCGTCACAA CCTGCTCAAT GCGCTGGCGG CTCTTGGAAT GGCGCTCACC CTTGGCATCG GGTTCCGGAC CGCAACCGGC GCGTTGGCCG ACTTCCATGG GATCGCGCGG CGATTGAGCC GCATTGGCAC GGGAAGCCAG CCGCGCATCT TCGACGACTT TGCCCATCAC CCGACCGAGA TCGCGGCCTC GATCGCCGTC CTTCGCGAGA CGACGCAAGG GCGGCTGATC GCGATCCTTG AGCCTCAATT GCACAGCCGG GTCTCGCGCA TGGCCTTGCG CTTCGCGCAG GCCCTGGGTG CGGCGGACCG CAGCTACATC CTGCCGGTGG CGGCGCTCGG CGAGGCCGTG CAAGCGGGGA ACGGAGATGC CGCGCTGGCC GATGCCTGCC GTTCCGTGGG GCTGTCCTGC CAACACGTCT CGGGCATGCC AGAGCTGCTG TTGCGGTTGA AGGACGATCT GCAAGGCGAC GACACGCTTG TCGTCATGGC GGGAGCCAGC GGTGCGGCCA TCGCTCCGCG GATTGCCGAG GCCCTTTCCC GACCGCCTGC GCGCATGTCT GCACCCGCAC CGAGCGTCCT GATCGGAGAG AGGCGGCCCT TGCCGCCCGA TCTGCTGGCC CTCGTCGCCG CGCACGCCGA CCGGCAGCCG ACGGCGCCGG CCGTTGAAAT GGGGCACCGC CGCCTCAGCT ACGCGGATCT TGTGCTCAGA ACCGATGACC TCTCCGCAAC CCTTGCAGCA GCCGGTGTCG GGGCCGGCGA CAGCGTAGGT GTCTGCCTTG GCCGGACGGT GGACCGTGTG ACCGCGTTCC TCGCCATTCT TCAGCTTGGC GCCATCTTCG TGCCGCTCGA CCCGACCCTG CCGGACGAGA GGCTGCGCAC CATGCTGGAG ACCGCCGGCG TGCGGACGGT CGTCGTGAAT GCCGCAAGCC CTGCCTTGCC GGATACCGGC CTTCGCATCG TGAATTGCGG CCAGCTGCCG GATCGGGACG GCCGGCCCGA GGCCTGTTGG CGACCGCAGG AATCTGCGGC GGATGCGCCG GCCTACATGA TCTTCACCTC CGGGACGACC GGACAGCCCA AGGCGGTCGA GATCTCGCGC GGCGCGCTTG CCAACTACGC GGTCGCGGCG GCCCGGCACT TCCAGATCAC CGCCAGCGCG CGCGTCTCGC AGATCAGCGG CTTCGGCTTC GATGTCTCGG TGGGGGACAT GGCCATGGCG CTGGCCGGTG GAGCCTGCCT TGTCTATCCC TCGGATTTGC AGGCGATCCC CGGCCCGCCC GTCGGTCGCT TCATCGCGCA GGCCCGGCTG ACGCATCTCT CGCTGACGCC TTCGGCCCTG GCGATCGTTC CGCAGGCAGA GCATCCGCAT CTGACCCATG TGATCGTTGC GGGCGAAGCA TGCCCGCCCG CGCTGGTCGA GCGCTGGGGG AAAGGCCGCA CCTTCATCAA CGCCTATGGG CCGACGGAAG CCACGGTCGA AGCTCTGTTC GCCATTTGCG CGCCCGGCAA GCCGGTCGCC ATCGGACGGC CGTTCGACAA CATGGGGGCC TGCCTGATGG ATGAGACCCT CCAGCTCGCC GCACCGGGAC AGGAGGGAGA GCTTTGCCTG TTCGGGCCGG GCCTGGCCAA CGGGTATCGG CACCTGCCCG CGCTGACCGG GCAGCAGTTC CCGGTGGTCG ACATCCCCGG CCAGGGCACG ACCCGCATCT ATCGCACCGG AGACCGGGCA AAGGCCGGAT CCGATGGCGC GCTCGTCTAT CTGGGGCGCA TGGACAGCCA GTTGAAGTTC AATGGCTATC GCATCGAGGC CGGCGAGGTC GAGGCGGCCC TTTGCCGCCT GCCCGGCGTG ATTGACGCGG CCGTCTCGCT CGCCTCCTCT CCTCATTCGC CCGATCGTCT GATCGCCCAT GTGGTCATGA TGCCCGGCGC GCCCTTGCTC GATCCGGTCG AGCTGCGCGC GCAACTGCTG CAGCACCTGC CGTCCTGGAT GGTCCCCTCG GTCTTCCTTC CGGTTCCCGA GATTCCGCGC AACGCCAATG GCAAGCGTGA CCGCAGCGCG TTGCCGGTGC CGCCCCAGGT GACGCAGCCA CCGGATGCCC GCACCACCGG CACCGCGACC GAGGCAAAGC TCATGGCGCT GATCGACAGG GAGGCCGGGG CCAATGCCGT CGCCGGCACG CGCGACAGCC TGCGCGATGC CGGAATAGAC TCCCTGTCGA TGGCGAACCT CTTGTTCGCG ATCGAGGACG CCTTCGGCAT CACGCTCGAT GCCGGGTTCG AGGCCGGTTT CGATACCGTC GAAGTCCTGG CCCTGATGGT GGATGCGCGG CTCAAGGCCC CACATGCCCC CTCGTCGCCC GGCATCGAGG ATGCGCTGAC CGCCAGGATC ATGCCATATC TCGCGACCTG GCCAGGCCGG CGGCTTGGCA AAGCCGGGCT GGTGCGGAGC CTGGCCGACG AGCGGCCGCG TCCGAAGCTC TTCTGGTGCT TCCAGGCAGG CCATGAGCTT TCGCGGCTGA GCGAGAGTCT GGGCGACGCG GCGTCCCTGT TCGGATTGCG CTCGGGACAT CTTGCCGTCG AATACAGTGC CGACACTCTC AAGGCGCTCG GCCGGCTCTA TGCCGACGAG ATCACGGCCA TCGCCCCGAC CGGCCCCCTG TTCCTTGGCG GGAATTGCCA GGGGGGCCTC GTGATCCGCG AAGCCGGGCT GGAACTGATG CGTCAAGGCC GTAACGTGGC CCTGACCATC CTCATGGAGC AGGGCCGCTT CTTCCATTAT CCGGGCACCA CCCTGCTTCT CTTCGGCGCG GGCAGCTATC TCAATCCCTA TGGTCAGATG AATGCGCCGG AACAGGTGTT CCGCACCGCC TATCCTGCGG GCCATCATGT CGAGATCATC CCCGGGGCGC ATGGGCACTA TTTCATGCCC GAGAATGTCG ATGCCCTCGC CGCGACGATC CTGCGTCACC TCGACTGGCC TGCCCCCATG GGGCGGTCCG ATTTCAATCC TGCTGCATGA
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Protein sequence | MSDLARLHLI GVGGSGMLPL ALLLKQAGHP VTGSDNLCAP ARLALLEAQG IAVLSGADPT LARAADCVVA SPAIPETHVE RRAARRAGIP VKTRARMLAE LIADRLTICV AGSHGKSTVT AMLIHILSAA GKDDFGYMLG ASFADPGIVP ARLGAPDAPF VTEACEAHGA LAHWLPSHAI LTNLDDDHAD HYGGPSGLRR AFSAFLSRLP PEGRAVACGD DLDVVDILRE ARCAALTYGF RDENALRAVQ AGDGSATVFL HGTELGALSL AVPGRHNLLN ALAALGMALT LGIGFRTATG ALADFHGIAR RLSRIGTGSQ PRIFDDFAHH PTEIAASIAV LRETTQGRLI AILEPQLHSR VSRMALRFAQ ALGAADRSYI LPVAALGEAV QAGNGDAALA DACRSVGLSC QHVSGMPELL LRLKDDLQGD DTLVVMAGAS GAAIAPRIAE ALSRPPARMS APAPSVLIGE RRPLPPDLLA LVAAHADRQP TAPAVEMGHR RLSYADLVLR TDDLSATLAA AGVGAGDSVG VCLGRTVDRV TAFLAILQLG AIFVPLDPTL PDERLRTMLE TAGVRTVVVN AASPALPDTG LRIVNCGQLP DRDGRPEACW RPQESAADAP AYMIFTSGTT GQPKAVEISR GALANYAVAA ARHFQITASA RVSQISGFGF DVSVGDMAMA LAGGACLVYP SDLQAIPGPP VGRFIAQARL THLSLTPSAL AIVPQAEHPH LTHVIVAGEA CPPALVERWG KGRTFINAYG PTEATVEALF AICAPGKPVA IGRPFDNMGA CLMDETLQLA APGQEGELCL FGPGLANGYR HLPALTGQQF PVVDIPGQGT TRIYRTGDRA KAGSDGALVY LGRMDSQLKF NGYRIEAGEV EAALCRLPGV IDAAVSLASS PHSPDRLIAH VVMMPGAPLL DPVELRAQLL QHLPSWMVPS VFLPVPEIPR NANGKRDRSA LPVPPQVTQP PDARTTGTAT EAKLMALIDR EAGANAVAGT RDSLRDAGID SLSMANLLFA IEDAFGITLD AGFEAGFDTV EVLALMVDAR LKAPHAPSSP GIEDALTARI MPYLATWPGR RLGKAGLVRS LADERPRPKL FWCFQAGHEL SRLSESLGDA ASLFGLRSGH LAVEYSADTL KALGRLYADE ITAIAPTGPL FLGGNCQGGL VIREAGLELM RQGRNVALTI LMEQGRFFHY PGTTLLLFGA GSYLNPYGQM NAPEQVFRTA YPAGHHVEII PGAHGHYFMP ENVDALAATI LRHLDWPAPM GRSDFNPAA
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