Gene Rsph17025_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3307 
Symbol 
ID5085798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp179860 
End bp180786 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID640484879 
Producthypothetical protein 
Protein accessionYP_001169496 
Protein GI146279338 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.379943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA TCTCGATGAA GCATCTTCGC TACTTCGAGG CCCTGGCCCG GCACCAGCAT 
TTCGGCCATG CCGCCGAGGC GTGCCGGATC ACGCAGCCCG CGCTGTCGCT CCAGATGAAG
GAGCTTGAGG AGATGCTGGG CGCGGCCCTG ATCGAGCGGG GGCCGAAGCG GATCCGGCTG
ACCAGTCTCG GCGAGGATTT CGTCGCACGG GCGCGCGAGA TCCTGCGCGC CGTGGACGAG
TTGGGAGAGC TGGCCCGCGC CTCGGGCGAG GCTTTGCACG GGCGCTTCCG GCTGGGGGTG
ATCCCGACGG TTGCGCCCTA TCTGCTGCCG GCCATCATCC AGCTTCTGGC CCGCCATCAT
CCCCGGCTGG ATCTGCGTCC GCGCGAAGCC ACCACGCGAA AGCTGCTGGC GGACCTGAAC
GAGGGTCGCC TCGATGCGGC GATCATGGCG CTGCCGGTAT CCGAGCCCCT GCTGCACGAG
GAGCCGATCC TGGAGGAGGA GTTCATGCTG GTGCGCCCGC TGGCCGACGA GGGGCGGCCG
GTTCCCGACT CGGCGGGCCT GCGCGAGATG CGACTGCTGT TGCTGGAGGA GGGCCACTGC
TTCCGGGATC AGGCGCTGTC CTTCTGCAAC ATGCCCGCCG CGCCCTCGGA CCTGATGGAG
GGCAGTTCCC TGTCCACGCT GGTGCAGATG GTGGGGGCGG GGATCGGGGT GACGCTCGTT
CCCCAGATGG CCATCCCGCT CGAGACGGCT TCGGCCTCCG TCTCCGTTGC GCGGCTGAGA
GAGCCGCGGC CCCGCCGCAC GCTTGGCCTG GTCTGGCGCA GGAACTCGCC GCTCGCGCGG
CATCTCGGGC CGATGGCGGC CCATCTGCAA AGCCTCGCAG GCCAGGGGAC AGGACGCCAT
CCGGGCGGCG CTGCCGCGGG GGCCTGA
 
Protein sequence
MMNISMKHLR YFEALARHQH FGHAAEACRI TQPALSLQMK ELEEMLGAAL IERGPKRIRL 
TSLGEDFVAR AREILRAVDE LGELARASGE ALHGRFRLGV IPTVAPYLLP AIIQLLARHH
PRLDLRPREA TTRKLLADLN EGRLDAAIMA LPVSEPLLHE EPILEEEFML VRPLADEGRP
VPDSAGLREM RLLLLEEGHC FRDQALSFCN MPAAPSDLME GSSLSTLVQM VGAGIGVTLV
PQMAIPLETA SASVSVARLR EPRPRRTLGL VWRRNSPLAR HLGPMAAHLQ SLAGQGTGRH
PGGAAAGA