Gene Rsph17025_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3176 
Symbol 
ID5085661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp37587 
End bp38570 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content73% 
IMG OID640484748 
Productectoine utilization protein EutC 
Protein accessionYP_001169365 
Protein GI146279207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog 
TIGRFAM ID[TIGR02992] ectoine utilization protein EutC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.301146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGACC CCATCCTTCT GCTGACCGAG GCCGACCTGC GGACGCTGGT GCCGCTGGAC 
CTCGAGGCCG TCGCCTGCGT CGAGGGTGCC TTCCGCGCGC TCGCGACGAG GCCCGTCGCC
ATGCCGCCGA TCCTGCGGCT CGACATCCCC GAGCATCGCG GCGAGGTGGA CGTCAAGACC
GCCCACATCC CCGGCCTCGA CCATTTCGCC ATCAAGATCA GCCCCGGCTT CTTCGGCAAT
CCCGCGCTCG GCCTGCCTTC GACCAACGGG CTGATGGTCG TGCTTTCGGC GCGCACCGGG
CTGGTTCAGG CGATCCTGCT CGACAATGGC TACCTGACCG ACGTGCGCAC CGCTGCGGCG
GGCGCCGTCG CCGCGCGCCA CCTGAGCCGC GCCGACAGCA CGACGGTCGC GGTTCTGGGC
GCGGGGATGC AGGCCGAGCT TCAGGTGGCG GCGCTGCAAC TCGTCCGCCC GATCCGTGCG
GCCCGCGTCT GGGCGCGCGA CGCGGGCAAG GCCCGGGCGC TGTGCGCGCG GCTGGCGCAG
CGGGGACTGG AGGCCGCAGC CTGCGCCACC GCCGACGAGG CCACGAGTGG CGCCGACATC
GTCGTGACCG CGACGCCCGC CACGACGCCG ATCCTGCGCA CGGCCCATCC GGGGCAGCAC
ATCACCGCGA TGGGATCGGA TGCCGAGCAC AAGAACGAGA TCGCTCCCGA GCTGATCGCG
CGCACCGCCT ATGTCGCCGA CCGGCTGTCC CAGACCCGGC GTCTGGGCGA GCTGCACCAT
GCGATCGCCG CGGGCCTCGT GCCCGTCGAC CGGGACTTTC CGGAACTGGG GCAGGTGGTG
GCGGGCCTTC GCCCCGGCCG GACCGCGCCC GACCAGATCA CGCTGGCCGA CCTGACCGGC
ACCGGCATCC AGGACACCGC CATCGCCGCC CTCGCCGTCG CCCGCGCGAC CGCCGCGCAG
GCGGGCCAGA GCTTCACCGT CTGA
 
Protein sequence
MRDPILLLTE ADLRTLVPLD LEAVACVEGA FRALATRPVA MPPILRLDIP EHRGEVDVKT 
AHIPGLDHFA IKISPGFFGN PALGLPSTNG LMVVLSARTG LVQAILLDNG YLTDVRTAAA
GAVAARHLSR ADSTTVAVLG AGMQAELQVA ALQLVRPIRA ARVWARDAGK ARALCARLAQ
RGLEAAACAT ADEATSGADI VVTATPATTP ILRTAHPGQH ITAMGSDAEH KNEIAPELIA
RTAYVADRLS QTRRLGELHH AIAAGLVPVD RDFPELGQVV AGLRPGRTAP DQITLADLTG
TGIQDTAIAA LAVARATAAQ AGQSFTV