Gene Rsph17025_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3154 
Symbol 
ID5085639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp13738 
End bp14520 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID640484726 
Producthypothetical protein 
Protein accessionYP_001169343 
Protein GI146279185 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.87263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG ATTTCCTCAT CCGCGCAGCG CTCGCGGGCA TTGGCGTGGC GGCCGCGGCG 
GGGCCGCTCG GGGCCTTCGT CGTCTGGCGC CGGATGGCCT ATTTTGGCGA CGCCACCTCA
CATGCGGCAA TCCTCGGCGT GGCGCTCGCG CTTGCGACGG AGCTGCCGGT GGGACTGGGC
ACGCTGATCG TCGCGCTGGT GATGGCCGCG ACCGTTGCCA TGCTCAGCGG TCGCGGCTGG
GCCATGGACA CGATGCTGGG CGTGCTGGCC CATTCCGCGC TCGCCTTTGG CCTTCTGGCG
GTCAGCTTCC TTCCGTCGGT GCGCACCGAC CTGTCCGCCT GGCTCTTTGG CGACATCCTC
GCGGTGTCGC TGCCGGATCT CGCCTTCATC TGGATGGGCG CGGCGCTGGT TCTCGCGCTC
CTCATCTGGC GCTGGACGGC GCTTCTCACC TCCACGATCA ACGAGGATCT GGCGGCCGCC
TCGGGCATCG ATCCCGGCCG CGAGAGGCTG ATCCTGACGC TTGCCCTCGC GGTCACGGTG
GCGGTCGCGC TGAAGGTGGT GGGGGCGCTG CTGATCTCGG CCATGCTCAT CATCCCGGCG
GCGGCGGCGC GCGGCCTCGC CCGAAACCCC GAGCCGATGG CCCTGCTGGC GGCGCTGATC
GGGGCAGGGG CGAGCATCGC GGGCCTTGGC GCCTCGCTCA CCTTCGACAC GCCGGCCGGC
CCCTCGATCG TGGCGGCCGC GGCCCTGGCC TTCCTCGTCT CGGCGCTCCT GCGCCGCACC
TGA
 
Protein sequence
MLDDFLIRAA LAGIGVAAAA GPLGAFVVWR RMAYFGDATS HAAILGVALA LATELPVGLG 
TLIVALVMAA TVAMLSGRGW AMDTMLGVLA HSALAFGLLA VSFLPSVRTD LSAWLFGDIL
AVSLPDLAFI WMGAALVLAL LIWRWTALLT STINEDLAAA SGIDPGRERL ILTLALAVTV
AVALKVVGAL LISAMLIIPA AAARGLARNP EPMALLAALI GAGASIAGLG ASLTFDTPAG
PSIVAAAALA FLVSALLRRT