| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3142 |
|---|
| Symbol | |
|---|
| ID | 5085627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 2928 |
|---|
| End bp | 4130 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640484714 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169331 |
|---|
| Protein GI | 146279173 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.856051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.126426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA ACCGCTGGGC TTTTCTCGCA GTGGCCTGTG CCGCTCTTGT CCTGTCGCTT
TCCACCTGGT TCTCCGCCAC CGCCGTCATG CCGGAGCTTG TCGCACGCTG GAGCCTCGGG
CCCTCCGAGG CGGCCTGGCT GACGAACGGC GTGCAGGCCG GCTTTGTCAT CGGCGCACTT
GCCTCGAGCG TCCTGGGGCT GCCTGACCGG CTGCATCCCA ACCGGTTGAT GGCAGGGGCC
GCCGCGCTCG CGGGTGCCTC GACCCTCATC CTCCTGCTGG AGCCCGGCCC GGCGGCGGCC
ATCGCCGCGC GGCTTGTGAC CGGGATCGCC CTGGCGGGTG TCTATCCTCC GGCGATCCGG
CTGATGGCCA CATGGTTCCT GCGCGGCCGG GGATTGGCGC TCGGCTGCCT GATCGGGGCC
TTGACCCTCG GTTCCGCCTT GCCCCATCTG GTGCGGGGCG TGGGCGAGGT CCTCGACTGG
CGGCTGGTGA TCGCGGCCGC GGGCCTCTTC AGCCTGACGG CGGCACCGAT CTTCGGGCTG
GCGCTGCGAG AGGGGCCCCA TCCCTTTGGC CGCACCGGTC GCGTGGACCT GCGCCAGACG
CTCTCGATCC TGCGCAACCG CCCGGTCATG GCGGCCAACC TCGGATATTT CGGCCACATG
TGGGAGCTTT ACGCGATGTG GGGCTGGTTC CTGGCCTGGG CCCGTGCGGC TTCCGAGGCG
GGGCTCGGGC TGGGCAACCT CTCGCTTCTG ACCTTTGCGG TGCTGGCGGC GGGCGCCCCC
GGCTGCGTGC TGGGCGGGCT GCTGTCGGAC CGGATCGGGC GCTGCCGGAC GACCGCCCTC
GCCCTCGGCG TCTCGGGCTG CTGCGCGCTG GGGATCGGTC TGGCCTGGAG CGGCCCGGCC
TGGCTGCTCG TGGGGCTGGC GTTGCTCTGG GGGCTCGCGG TCGTGGCCGA CAGCGCGCAG
TTCTCGGCCG CGGTCACCGA ACTGTCGCCG CCGCATCTGG TGGGCTCGGC GCTGGCCTTC
CAGATGGGAG TGGGCTTTGC CCTGACGATC TTCACCATCT GGGCGCTGCC GCTGCTGGCC
GGCATCATCG GCTGGCGCTG GGTGTTTCTT GCGCTGGTGC CAGGCCCCTT CCTGGGGGCC
TGGTCGATGC TCGCCCTGCG CCGGATGCCC GAGGCGGCCG GGATGGCGCA CGGAATGCGA
TAA
|
|---|
| Protein sequence | MSGNRWAFLA VACAALVLSL STWFSATAVM PELVARWSLG PSEAAWLTNG VQAGFVIGAL
ASSVLGLPDR LHPNRLMAGA AALAGASTLI LLLEPGPAAA IAARLVTGIA LAGVYPPAIR
LMATWFLRGR GLALGCLIGA LTLGSALPHL VRGVGEVLDW RLVIAAAGLF SLTAAPIFGL
ALREGPHPFG RTGRVDLRQT LSILRNRPVM AANLGYFGHM WELYAMWGWF LAWARAASEA
GLGLGNLSLL TFAVLAAGAP GCVLGGLLSD RIGRCRTTAL ALGVSGCCAL GIGLAWSGPA
WLLVGLALLW GLAVVADSAQ FSAAVTELSP PHLVGSALAF QMGVGFALTI FTIWALPLLA
GIIGWRWVFL ALVPGPFLGA WSMLALRRMP EAAGMAHGMR
|
|---|
| |