Gene Rsph17025_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2284 
Symbol 
ID5083704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2323282 
End bp2324376 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID640483848 
Productinner-membrane translocator 
Protein accessionYP_001168479 
Protein GI146278320 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.332581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.870366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGGA TGCCGGGCTG GGCGGATGCG CTCCTCGTGC CGCTGATCTC GCTTCTGGTG 
GCCTTTGCCA TCTCGTCGCT GGTGATCCTC GCCATCGGCG AGAACCCGTG GGAGGCGATG
AAGCTCATGG TGACGGGGGC GCTCGGCTCC AGCTACGGCT GGGGCTACAC GCTCTATTAC
GCGACGAACT TCATCTTCAC CGGGCTGGCC GTGTCGGTGG CCTTCCATGC CGGCCTGTTC
AACATCGGCG GCGAGGGTCA GGCGACGCTG GGCGGGCTCG GGGTGGCGCT CGCCTGCCTC
TTCGTGCCCT GGCCGCACTG GTCGCTGGCG CTGATCGGGG CCGCGGCGAT GGGCGCGGCC
TTCGGCGCGC TCTGGGCTGC CCTGCCCGCC TGGCTTCAGG CCCGCCGCGG CAGCCACATC
GTCATCACCA CGATCATGTT CAACTTCATC GCCGCCTCGC TGCTGAACTA CGTCCTTGTC
AACGTGCTGC GCCCGACCGG CAGCATGGAC CCGGCGACCG CGCGCTTTCC CGCGGGCACG
AACCTGCCCG GCATCGGCGA TATGCTCACC GCCATCGGCA TCCCCTTCGC CCGGACGACT
CCCGCCAACA TCAGCCTTTT CGTCGCGATC GGGGCCTGCA TCCTCGTCTG GGCGCTGATC
TGGCGGACGC GGCTCGGCTA CGAGATCCGC GCCTTCGGCA AGTCCGAAAA GGCCGCCGTC
TATGCCGGGA TCTCGCCCGT CCGCATCACC CTGCTGGCCA TGCTGATCTC GGGGGCGCTG
GCGGGCCTCA TGGCGATCAA CAACGTGATG GGCGAGGCCG AGCGGCTGGT GCTGAACTCG
GTCGAGGGGG CGGGCTTCAT CGGCATCGCG GTGGCGCTCA TGGGGCGCAG CCACCCGTTC
GGGGTGCTGC TGGCGGCGCT GCTGTTCGGC TTCCTCTATC AGGGGGGCGC GGAGCTTGCG
CTCTGGACCT CGATCCCGCG GGAGCTGATC ACCGTGATCC AGGCGCTGGT GATCCTGTTC
ACGGGCGCGC TCGACAACAT GGTGCGCCAG CCGGTCGAGG CCCTGTTCCT GCGCGCGCGG
AAGGGGGCGA AGTGA
 
Protein sequence
MDRMPGWADA LLVPLISLLV AFAISSLVIL AIGENPWEAM KLMVTGALGS SYGWGYTLYY 
ATNFIFTGLA VSVAFHAGLF NIGGEGQATL GGLGVALACL FVPWPHWSLA LIGAAAMGAA
FGALWAALPA WLQARRGSHI VITTIMFNFI AASLLNYVLV NVLRPTGSMD PATARFPAGT
NLPGIGDMLT AIGIPFARTT PANISLFVAI GACILVWALI WRTRLGYEIR AFGKSEKAAV
YAGISPVRIT LLAMLISGAL AGLMAINNVM GEAERLVLNS VEGAGFIGIA VALMGRSHPF
GVLLAALLFG FLYQGGAELA LWTSIPRELI TVIQALVILF TGALDNMVRQ PVEALFLRAR
KGAK