| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2156 |
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| Symbol | |
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| ID | 5082934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2184746 |
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| End bp | 2186377 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483719 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001168351 |
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| Protein GI | 146278192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.470572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG AGAGACTGCA TCCCGCGGCC CTGATGCATC AGGTCGAAGT TGCGGCGGGC
CGGATGAGCC GACGCGAGTT CCTGAGCCGG GCCACCGCGC TCGGCGTTTC GGCGGGCGCG
GCCTACGGCC TGCTGGGGCT GGCATCCCCC GCCCGCGCGC AAGAGGCGCC GCGGCCCGGC
GGCACCCTGC GCATGGAGAT GGAGACCCGG GCGCTCAAGG ATCCGCGGAC GGCCGACTGG
TCGCAGATCG CGAACTTCAC CCGCGGCTGG CTGGAGTATC TGGTGGAATA CCAGGCCGAC
GGAACCTTCC GGCCGATGCT CCTCGAAAGC TGGGAGGCCA ACGACAACGC CACGGAATAC
CGGCTGAACG TCCGCCCCGG CGTGCGCTGG AGCAACGGCG ACCCCTTCAC CGCCGAGGAT
GTCCGGCACA ATTTCGAGCG CTGGTGCGAC GCCTCGGTCG AGGGGAACGC GATGGCGGCC
CAGATGGTGG CCCTGCAGGC CGAGGGCAAG CTGCGGCCGG ACGCGATCGA AGTGGTGGAC
GAGACGACAC TCCGGCTGAC ACTCTCGCAG CCCGACATCG CGCTGATTGC GAACCTCGCC
GACTATCCGG CTGCGATCGT CCACCCCTCC TACGAGGGCG GCGACCCGGC GGCCAATCCC
GTCGGAACCG GGCCCTATCG GCCGGAAACG GTGGAGGTGG GCATCCGCAT GGTGCTGGTC
CGCAACGAGG CGCATCCCTG GTGGGGCAGC GACGTCCACG GCGGCCCCTG GCTCGACCGG
ATCGAATATC TCGATTTCGG CAGCGATCCC TCGGCCGCCG TGGCCGCGGC GGGATCGGGC
GAGATCGACG CGACCTATCA GACCGTGGGC GAGTTCATCG AGGTGCTGGA CGGGCTTGGC
TGGGACAAGT CCGAAGCCCG CACCGCGACC ACCCTTGCGA TCCGGTTCAA CCAGCAGTCC
GAGGAGTACC GCGACGTCCG CGTGCGCCGG GCGCTGCAGA TGGCGGTGGA CAATGCGGTG
GTGCTGGAAC TGGGCTACTC GGGCCACGGG CATGTGGCCG AGAACCACCA CGTCAGCCCG
ATCCATCCCG AATATGCCGA GCTGCCGCCG CTGACCGTCG ATCGCGCGCA GGCCCGGGCC
CTGCTGGAAG AGGCCGGGAT GGACGGCCAC GAGTTCGAGC TGGTCTCGCT CGACGACGCC
TGGCAGGCGG CCTCGTGCGA CGCCGTGGCG GCGCAGTTGC GGGACGCCGG CGTGTCGATC
CGGCGGACGG TCCTGCCCGG CGCGACCTAC TGGAACGACT GGCTGAAGTT CCCCTTCTCG
GCGACCGAGT GGAACATGCG CCCGCTGGGG GTGCAGGTTC TGGCGCTCGC CTATCGCTCG
GGGGTGCCCT GGAACGAATC CGGCTTTGCC AACAAGGAGT TCGACGCCAA GCTTGATGAG
GCCATGTCGA TCGTCGATCC CGACGGGCGC CGCACCCTCA TGGCCGATCT CGAGCGGATC
CTGCAGGAGG AGGGCGTGCT GATCCAGCCC TACTGGCGCT CGATCTTCCG CCATGTCGAT
CCGAAGGTGA AGGGTGCCGA GGCCCACCCG ACCTTCGAGC ATCACCATTA CAAGTGGTGG
ATCGACGCCT GA
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| Protein sequence | MTSERLHPAA LMHQVEVAAG RMSRREFLSR ATALGVSAGA AYGLLGLASP ARAQEAPRPG
GTLRMEMETR ALKDPRTADW SQIANFTRGW LEYLVEYQAD GTFRPMLLES WEANDNATEY
RLNVRPGVRW SNGDPFTAED VRHNFERWCD ASVEGNAMAA QMVALQAEGK LRPDAIEVVD
ETTLRLTLSQ PDIALIANLA DYPAAIVHPS YEGGDPAANP VGTGPYRPET VEVGIRMVLV
RNEAHPWWGS DVHGGPWLDR IEYLDFGSDP SAAVAAAGSG EIDATYQTVG EFIEVLDGLG
WDKSEARTAT TLAIRFNQQS EEYRDVRVRR ALQMAVDNAV VLELGYSGHG HVAENHHVSP
IHPEYAELPP LTVDRAQARA LLEEAGMDGH EFELVSLDDA WQAASCDAVA AQLRDAGVSI
RRTVLPGATY WNDWLKFPFS ATEWNMRPLG VQVLALAYRS GVPWNESGFA NKEFDAKLDE
AMSIVDPDGR RTLMADLERI LQEEGVLIQP YWRSIFRHVD PKVKGAEAHP TFEHHHYKWW
IDA
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